| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4352 |
|---|
| Symbol | |
|---|
| ID | 8015127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4478016 |
|---|
| End bp | 4479470 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644826928 |
|---|
| Product | Mannitol dehydrogenase domain proteiin |
|---|
| Protein accession | YP_002978131 |
|---|
| Protein GI | 241207035 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000397508 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAC GACTGCAGAC CCTTTCCGGC CTCGCCTCGA CGGCGAAGCT TCCCGCCTAT
GACCGCGACC AGCTGAAAAG CGGCATCCTG CATCTTGGGC CAGGCGCCTT TTTCCGCGCG
CATTTCGCGC CGTTTACCGA TGCCGCACTT GCCGCAGTGG GCGGAGACTG GGGCATCGAG
GTGGCAAGTC TGCGCACTGC TGATGTCGCC GATCACCTGA ACGAACAGAA CGGCCTCTAT
ACGATGCTGA TCCGCGATAC GTCGGGCACG GTGGCGCAGG TGATCGGCCC CATTTTGCGG
GCACATGTGG CGACACGCGA TCCGTCAGGA CTGCTGGATC GTCTGGAAGA TCCGACCATC
CGCATCGTCA GCCTGACGGT GACGGAAAAA GCCTATGGCA TGGATACCGC GACGGGAGGG
CTCGATCTCA ACCATGCCGA TGTGGCGGCC GACCTTGCCA ACCGCCATGC GCCGCGCGGC
GTCATCGGCT ATCTGGTCGA GGGACTGTCC CGGCGCCGGG CGAAGGGCAT CGCCCCCTTC
ACACCGCTCA GCTGTGACAA TCTTCCGAGC AACGGCGCCG TCCTGAAGCG GCTGGTTCTC
GATTTTGCCG AACGCGTCGA CCCCTCGCTT CGTCAATGGA TCGAGGCAAA TGTGCCCTTC
CCCTCGACCA TGGTCGATCG CATCACGCCG GCCAGCACCG AGGCGACTTA CCAGGATGCC
GAACGGCTGA CCGGACGGCA GGATCTGGCG GCGATCGAGA CCGAACCCTT CACGCAATGG
GTGATCGAGG ATGATTTCGC CAATGGCCGG CCGGCCTGGG ACAAGGCCGG CGCGCTGATG
GTCACCGATG TTTCGGCTTA CGAGAAGATG AAGCTCCGGA TGCTGAACGG CGCGCATTCA
CTGCTCGCCT ATCTCGGTTA TATCGGCGGC TATGAATTCA TCCGCGACGT GATGGATGAT
GCCGGCCTGG CGGCCCTTGC CTACCGCCAC ATGCATGCGG CGGCGAGAAC GCTCGATGCG
GTTCCCGGCA TCGACCTCGA TGACTATGCC AGCGAATTGA TAGCGCGCTT TGCAAACAAG
GCCATCGCGC ATCGCACCTA TCAGATCGCC ATGGACGGCA CGCAGAAACT GCCGCAGCGG
CTGCTGGAAC CGGCAACCGA GGCACTGGCG CATGGCGACA AGGCGGAGAC CTATGCGATC
GCCGTTGCGG CATGGATGCG CTATGCGATC GGCGAGCACG GCAACGGCGA GCGCTATGAA
CTGCGCGATC CCCGTGCTGG CGAAATCGCC GCTCTCATCG CCGATGTTCC ACGCACCGGC
CTGGCGATTT CGGCCGCTCT CTTCACCCTT CCGGGACTCT TCCCGGCAGC TTTGACAGAA
AATCGGGCGT GGACGCAGGA TGTCTCCGAC AAGCTGGAGA TCCTGATCCA AGACGACCGG
CTGCCGCTGT TCTGA
|
|---|
| Protein sequence | MTERLQTLSG LASTAKLPAY DRDQLKSGIL HLGPGAFFRA HFAPFTDAAL AAVGGDWGIE
VASLRTADVA DHLNEQNGLY TMLIRDTSGT VAQVIGPILR AHVATRDPSG LLDRLEDPTI
RIVSLTVTEK AYGMDTATGG LDLNHADVAA DLANRHAPRG VIGYLVEGLS RRRAKGIAPF
TPLSCDNLPS NGAVLKRLVL DFAERVDPSL RQWIEANVPF PSTMVDRITP ASTEATYQDA
ERLTGRQDLA AIETEPFTQW VIEDDFANGR PAWDKAGALM VTDVSAYEKM KLRMLNGAHS
LLAYLGYIGG YEFIRDVMDD AGLAALAYRH MHAAARTLDA VPGIDLDDYA SELIARFANK
AIAHRTYQIA MDGTQKLPQR LLEPATEALA HGDKAETYAI AVAAWMRYAI GEHGNGERYE
LRDPRAGEIA ALIADVPRTG LAISAALFTL PGLFPAALTE NRAWTQDVSD KLEILIQDDR
LPLF
|
|---|
| |