Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4080 |
Symbol | |
ID | 8015886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4154904 |
End bp | 4155716 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644826649 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002977860 |
Protein GI | 241206764 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.748403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGC GACCATCGCC CGACAGACAC GTCAAGGACG ACTATCCCTG GTGGCTGGTC GCCCTCGTCA CGATCGGCAT CGTCCTTGCC GTCGTCATCG TCGCCAACGA TATATACGCC CAGGTCTTCC GCACCGTCGT CAACGGTGTC GGCGTCACCG TCTTCGTCAC GCTGGTCGCC TTCGTGCTCG CCACCGTGCT CGGCCTCGGC ATCTGCCTGC TCGGCATGGC CGACAGCCAG GTGCTGCGTC AGATTGCGCG ATTCTACATC GAGATCATCC GCGGCATACC GATCCTCGTG CTGCTGTTCT ACGTCGCCTT CGTCGGCGCG CCGGCTCTGG TCGCAGCCTA TAATTTCCTG ATTTCGCCGC TGGTGACATC CGGCATGGCC GAGCCCATCC TGGTGCGCGA CCTGTCGCTG ATGTGGCGAG CGATCATCGC GCTGACGGTC GGTTATTCCT CCTTCATCGC CGAAATCTTC CGGGCCGGTT TCCAGTCGGT CGATCTCGGC CAGATCGAGG CGGCCAAGGC GCTTGGCCTG TCGCGCTACC GGCGCTTTCG CTCCGTCGTG TTCCCGCAGG CGATCCGGGT GATCTTCCCG CCGCTCTCCA ACGATTTCGT CTCGATGGTG AAGGACAGCT CGCTCGTCTC CGTGCTCGGC GTCGCCGACA TCACCCAGAT GGGCAAGGTC TATGCCGCCG GCTCCTTCCG CTTCTTCGAG ACCTATTCGA TCGTCACCTA TATCTATCTG ATCCTGACGA TCGGCCTGTC GCTGGCGCTC CGGCGGACGG AGAAATGGAT GAAGTCGCGG TGA
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Protein sequence | MALRPSPDRH VKDDYPWWLV ALVTIGIVLA VVIVANDIYA QVFRTVVNGV GVTVFVTLVA FVLATVLGLG ICLLGMADSQ VLRQIARFYI EIIRGIPILV LLFYVAFVGA PALVAAYNFL ISPLVTSGMA EPILVRDLSL MWRAIIALTV GYSSFIAEIF RAGFQSVDLG QIEAAKALGL SRYRRFRSVV FPQAIRVIFP PLSNDFVSMV KDSSLVSVLG VADITQMGKV YAAGSFRFFE TYSIVTYIYL ILTIGLSLAL RRTEKWMKSR
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