Gene Rleg_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3974 
Symbol 
ID8015874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4050914 
End bp4051876 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID644826543 
Productmalate dehydrogenase 
Protein accessionYP_002977754 
Protein GI241206658 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01763] malate dehydrogenase, NAD-dependent 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.342256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTA ACAAGATCGC ACTCATTGGT TCTGGCATGA TTGGTGGCAC GCTGGCGCAC 
CTCGCCGGCC TGAAGGAACT GGGCGACATC GTTCTCTTCG ACATCGCGGA CGGCATTCCC
CAGGGCAAAG GTCTCGATAT CTCCCAGTCG TCGCCGGTCG AAGGCTTCGA CGTCAATCTG
ACGGGTGCCA GCGACTATTC CGCGATCGAA GGCGCTGACG TCTGCATCGT CACGGCAGGC
GTCGCCCGCA AGCCCGGCAT GAGCCGCGAT GACCTTCTCG GCATCAACCT CAAGGTCATG
GAGCAGGTCG GCGCCGGCAT CAAGAAATAT GCCCCGAACG CCTTCGTGAT CTGCATCACC
AACCCGCTCG ACGCCATGGT CTGGGCGCTG CAGAAGTTTT CCGGTCTTCC GGCCAACAAG
GTCGTCGGCA TGGCTGGCGT TCTCGACTCC TCGCGCTTCC GTCTTTTCCT CGCCAAGGAA
TTCAACGTGT CCGTCCAGGA TGTCACGGCC TTCGTTCTCG GCGGCCACGG CGACACGATG
GTGCCGCTCG CCCGCTACTC GACGGTCGGC GGCATTCCGC TCACCGATCT CGTCACCATG
GGCTGGGTCA CCAAGGAGCG CCTCGAAGAG ATCATCCAGC GCACCCGTGA CGGCGGTGCC
GAAATCGTCG GCCTGCTGAA GACCGGCTCG GCCTATTACG CGCCGGCCGC CTCGGCAATC
GAGATGGCCG AATCCTACCT CAAGGACAAG AAGCGTGTTC TGCCTTGTGC TGCCCACCTC
TCCGGCCAGT ACGGCGTCAA GGACATGTAT GTCGGCGTTC CTACCGTCAT CGGCGCCGGC
GGCGTCGAGC GCATCATCGA GATTGATCTC AACAAGACCG AGAAGGAAGC CTTCGACAAG
TCCGTCGGCG CAGTCGCCGG TCTCTGCGAA GCCTGCATCA ACATCGCGCC TGCCCTGAAG
TGA
 
Protein sequence
MARNKIALIG SGMIGGTLAH LAGLKELGDI VLFDIADGIP QGKGLDISQS SPVEGFDVNL 
TGASDYSAIE GADVCIVTAG VARKPGMSRD DLLGINLKVM EQVGAGIKKY APNAFVICIT
NPLDAMVWAL QKFSGLPANK VVGMAGVLDS SRFRLFLAKE FNVSVQDVTA FVLGGHGDTM
VPLARYSTVG GIPLTDLVTM GWVTKERLEE IIQRTRDGGA EIVGLLKTGS AYYAPAASAI
EMAESYLKDK KRVLPCAAHL SGQYGVKDMY VGVPTVIGAG GVERIIEIDL NKTEKEAFDK
SVGAVAGLCE ACINIAPALK