Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3745 |
Symbol | |
ID | 8014580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3795461 |
End bp | 3796315 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644826308 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_002977527 |
Protein GI | 241206431 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.343445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAAGACT TTGTGCAAAA ACTCAGGCAA TACGCAAAAA CCGGCACACC CGCCGAGCGC CGTATCGCGA AATATTTCAC CGAACATCTG AACGACCTGC CATTCGAGAC GGCTGCGTCC GTTGCCGACA GGCTGGATCT CTCGCCGATG ACCGTCGGGC GCTTTCTGCG CTCGCTCGGT TATCAGGGAT TGGACAGCGT CAAGGTGGAG ATTCGCGAGA CCGTGACGAC ATCGCCGGCG CAATTACAGA GCGCCATGAG CGAGCTGCAT GCCGACGCCG CGGAGGGCAA ACCGCTGGCC GTGCTGGTTG CCGAACAGAT CCAGGCCCTC CATCATATCT ATCATCTGAC GGCGCAGCCG CACTGGTCGG AAGCCGTCGG CTTGATCAGC ACTGCCCGCG AAGTGTCGAT CGCCACGCAT GCGCGGCTCG CAAGCCTGGC CAATCATTTC TGCCAGCGGC TGACACAAGC CCGCGACGGC GTGCGCACGC TCGACGCCGC CGACAACCGT TTTGCGGAAC TCTTCGCCCG GCTGGCGGTC GACGACGCAC TGCTCGTCAT CATCGATTGT CGCCGCTTCG CCAAGGCGCG GCTGCTTGCC AGAACGGCGC GGCGCTACGG CTATAAGGTC GTGCTGATTT CGCCGCAGCA AGCGGACTGG ATGGCGGACC AGTCGAACGT CATGCTGCCT CTGCCGCCCG CTCGTGCACC CGATCTCGAC AATCTTCCGC CGCTGATCGC GCTGCTCGAT TGCCTGTCGG AATCCGTCAT CCTCCAAGTC GGAGAAGAGG CGGCACTTCG CCGCCGCCGC ATGATGGAGT TCGCGACCGT GCTCGGCGAG ACGGCGAACC ACTAA
|
Protein sequence | MEDFVQKLRQ YAKTGTPAER RIAKYFTEHL NDLPFETAAS VADRLDLSPM TVGRFLRSLG YQGLDSVKVE IRETVTTSPA QLQSAMSELH ADAAEGKPLA VLVAEQIQAL HHIYHLTAQP HWSEAVGLIS TAREVSIATH ARLASLANHF CQRLTQARDG VRTLDAADNR FAELFARLAV DDALLVIIDC RRFAKARLLA RTARRYGYKV VLISPQQADW MADQSNVMLP LPPARAPDLD NLPPLIALLD CLSESVILQV GEEAALRRRR MMEFATVLGE TANH
|
| |