Gene Rleg_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3725 
Symbol 
ID8014563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3779157 
End bp3780122 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID644826288 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977507 
Protein GI241206411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA TCTTCATCAC CACCAATGAG GCGACATCGA TTCTTCCGGG GCGCGGCGGC 
CTCTTCGGCC GGCTGTCCGA TGCCTTCTGG CGGCACCCGA AACTGCTGCT CTTCCTGATG
CTGACGCCGC CGCTGCTCTG GCTCGGCATC ATCTATATCG GTTCGCTGCT CGCCCTGCTT
CTGCAGAGTT TCTTTTCGAT CGACGATTTC TCAGGCCTGG TGAATTACGA ATTCACCCTT
GCGACCTATG CGCAGCTTCT GAGCCCGACG AATTTCGACA TTATCATCCG CACTTTCGTC
ATGGCGGCAC TAGTGACCGT CGCTTCCGCC TTGATCGCCT TCCCGATCGC CTACTACACG
GCGCGTTATG CGCAAGGCAA ATGGAAGGCG CTTTTCTATC TCGGCATCAT GCTGCCGCTC
TGGTCGAGCT ATCTCGTCAA GATCTACGCC TGGAAGCTGA TCCTCGCCAA GGAAGGCATC
CTCACCTGGA TCTTCGAGAA GCTCTATCTC TCCTGGCTGC TCGACGGCAT CCTGAACCTG
CCCGTCATCG GCGGCAATTC GCTCTCGGTC AGCTACCTCG GCACCTTCAT CGTCTTCGTC
TATATCTGGC TCCCCTATAT GATCCTGCCG ACGCAGGCAG CCCTCGAGCG TGTGCCCGGC
AACCTGATCG AGGCCTCGTC GGATCTCGGC GCCACGCCGC GCCAGACCTT CCGAACGGTG
CTGCTGCCGC TCGCCCTGCC CGGCATCGTC GCCGGCTCGA TCTTCACCTT CTCGCTGACA
TTGGGCGATT ATATCATCCC GCAGATCATC GGCTCGTCCA GGCTCTTCAT CGGCCAGGCG
GTCTATACCC AGCAGGGAAC GGCCGGCAAC GTGCCGCTTG CTGCCGCCTT TTCCGTCGTG
CCGATCGTCA TCATGGCGCT CTATCTCTGG CTCGCCAAGA AACAGGGAGC TTTCGATGCG
CTCTGA
 
Protein sequence
MTAIFITTNE ATSILPGRGG LFGRLSDAFW RHPKLLLFLM LTPPLLWLGI IYIGSLLALL 
LQSFFSIDDF SGLVNYEFTL ATYAQLLSPT NFDIIIRTFV MAALVTVASA LIAFPIAYYT
ARYAQGKWKA LFYLGIMLPL WSSYLVKIYA WKLILAKEGI LTWIFEKLYL SWLLDGILNL
PVIGGNSLSV SYLGTFIVFV YIWLPYMILP TQAALERVPG NLIEASSDLG ATPRQTFRTV
LLPLALPGIV AGSIFTFSLT LGDYIIPQII GSSRLFIGQA VYTQQGTAGN VPLAAAFSVV
PIVIMALYLW LAKKQGAFDA L