Gene Rleg_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3706 
Symbol 
ID8014544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3755847 
End bp3756851 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID644826269 
Productinner-membrane translocator 
Protein accessionYP_002977488 
Protein GI241206392 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.637678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA ACGAGGAGAC CAGGGAAATC CGGCGCCGAT CCTGGCGGGA TGTCGACCTG 
CGTGCGGTCG CTCCCTTCGT CGCCCTGGCG CTGCTGCTGA TCGTCGGAGC CTTGGTCAAT
CCCAATTTCA TCGGCATCAC CAACCTTGCC AATGTCGCGA CGCGCAGCGC TTTCATCGCC
ATCATCGCGG TCGGTGCGAC CTTCGTGATA TCAGCAGGCG ATCTCGACTT GTCTGTCGGC
TCGATGGTGG CCTTCGTCGC CAGCCTGATG ATCCTGCTGA TGAATTCGGG CGCCATCGAA
AACCCGGCTT TGATGCTGAC GGTCGCCGCC GTCTTCACGA TCGTCGCCGG CGCGCTTTGC
GGCCTGGCGA ACGGCCTGAT CACGACGGTC GGCAGGATCG AGCCCTTCAT TGCGACGCTC
GGCACGATGG GCATCTATCG CGGCCTGACG ACCTGGCTGT CGCAGGGCGG TGCGATCACG
CTTCGCTCAG CCGATATCCA GACGCTCTAT CGCCCTGCTT ATTTCGGCAA TGTCGCCGGC
ATACCCGTGC CGATCGTGGT GATCCTGGCA GTGACGGCGG TTGCGGCCTT CATCCTCTAT
CGCACCCGCT ACGGGCGCCA CGTTGTTGCG GTTGGATCAA ACAGCGATGT CGCCCGCTAT
TCCGGTATCG CGGTCAACCG TGTGCGGACG ATCGCCTTCG TCATCCAGGG ATTGTGCGTC
GCCATTGCCG TGCTGCTCTA TGTTCCCCGT CTCGGCTCGA CGTCGGCGAC GACGGGCATC
CTATGGGAGT TGCAGGCGAT CACGGCCGTC GTCGTCGGCG GCACGGCCCT CAAAGGCGGC
GCGGGCAGGG TCTGGGGCAC GATCTGCGGC GCCTTCATTC TCGAACTGGT CGGCAACATC
ATGCTGCTTT CGAATTTCAT CAGCGAGTAT CTGATCGGCG CCATCCAGGG TGCGATCATC
ATCATCGCCA TGTTCGTCCA GCGCTCGCTG GTGCGCAAAT CATGA
 
Protein sequence
MSVNEETREI RRRSWRDVDL RAVAPFVALA LLLIVGALVN PNFIGITNLA NVATRSAFIA 
IIAVGATFVI SAGDLDLSVG SMVAFVASLM ILLMNSGAIE NPALMLTVAA VFTIVAGALC
GLANGLITTV GRIEPFIATL GTMGIYRGLT TWLSQGGAIT LRSADIQTLY RPAYFGNVAG
IPVPIVVILA VTAVAAFILY RTRYGRHVVA VGSNSDVARY SGIAVNRVRT IAFVIQGLCV
AIAVLLYVPR LGSTSATTGI LWELQAITAV VVGGTALKGG AGRVWGTICG AFILELVGNI
MLLSNFISEY LIGAIQGAII IIAMFVQRSL VRKS