Gene Rleg_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3692 
Symbol 
ID8015838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3741338 
End bp3742414 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content66% 
IMG OID644826255 
Producthigh-affinity nickel-transporter 
Protein accessionYP_002977474 
Protein GI241206378 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA AACGCCTTCC CCTCATCTTT TCCGCCGCCG TCCTCGCGCT GGTGACGGCG 
GCAAGCCTCG CCCATGCGCA ATCGCCGCTC GGCATCGGCA CGGCGGAACC AAGCTTCCAG
CCGACCGGCG GGCCGTTTGC GCCGCTATTT CTCTACGTCA ATTACGAGCA GCAGGCTTTC
TATCGGGCGC TGACCGGCGC CTTGAAGGCG ATGCGCCAAG ACCCCTGGCA GCTGGCTTCG
CTGATCGGCC TCTCCTTCGC CTATGGCGTC TTCCATGCCG CCGGCCCCGG ACACGGCAAG
GCGGTCATCT CCTCCTACAT GATCGCCAAC GAGGTCGAGC TGAAGCGCGG CGTGGTGATT
TCCTTCATTT CTGCCTTCGT TCAGGGCGTG GTGGCGGTGG CGCTGGTCGG CGGCGCCTGG
CTGGTGCTGC GCGGCACCGG CATTACGCTG ACGGCGGCGA CCCACGCAAT GGAGGTCGCA
AGCTTCGTCA TGGTCATCCT TTTCGGCGGC TGGCTGCTGT TCCGCAAACT GCGCTCGCTG
GTGGGCAACA TGCCGCGCCG CCGGCTGATG GCGACGCCTG CCGGTCCGGT CAGCATGATG
CTCGACTGGA AGGACAATGC GGCCGAACGC CAAGCCTATG CCTTCAACGG CAAGGCGCAG
CCTGTCGAAG CCGGCCATAC CTTCGTTCCC GGCATGGTCT GCGAGACCTG CGGCAATGCC
CATGTGCCCG ATCCGGCCTT GCTCGGCGGC GACAGGTTCA GCGCCAGCGA GGCCTGGTCG
GCGATCGTAG CCGTCGGTCT GCGCCCCTGT TCCGGCGCAT TGCTGGTCAT GACCTTCTCA
CTGCTGAACG GGCTCTATCT CGGCGGCGTG CTTTCGGTCG CCGCCATGTC GCTCGGCACG
GCGATCACCG TTTCCCTGCT TGCCACACTT GCCGTTACTG CCAAGAGCGC GGCCGTCCGC
CTCTCCGGAC GCGGCTCGAC CACCTCGATC TGGGTCGGCA ACGCCATCGA AATCCTCGGC
GCCGTGCTCG TCATGCTGAT GGGCGCCCTG CTGCTCGGGG CCTCGCTGCA GGGATAA
 
Protein sequence
MLTKRLPLIF SAAVLALVTA ASLAHAQSPL GIGTAEPSFQ PTGGPFAPLF LYVNYEQQAF 
YRALTGALKA MRQDPWQLAS LIGLSFAYGV FHAAGPGHGK AVISSYMIAN EVELKRGVVI
SFISAFVQGV VAVALVGGAW LVLRGTGITL TAATHAMEVA SFVMVILFGG WLLFRKLRSL
VGNMPRRRLM ATPAGPVSMM LDWKDNAAER QAYAFNGKAQ PVEAGHTFVP GMVCETCGNA
HVPDPALLGG DRFSASEAWS AIVAVGLRPC SGALLVMTFS LLNGLYLGGV LSVAAMSLGT
AITVSLLATL AVTAKSAAVR LSGRGSTTSI WVGNAIEILG AVLVMLMGAL LLGASLQG