Gene Rleg_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3674 
Symbol 
ID8015834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3722747 
End bp3723286 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content57% 
IMG OID644826237 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002977456 
Protein GI241206360 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.396791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAC TTCTGGCCGC AAGCCGGCTG ATTGACTCGA TCAGTCAGTT CATGGGCAAA 
CTTTCCGAAT ATATGGTGCT GTTCTGCTGC CTGATCAGCG CCGGAAACGC CATCGTCCGC
TACGCCTTCA ACTACAGTTC GAACGGCTGG CTGGAGATTC AGTGGTATCT CTTCGCCTTC
GTCGTCATGC TCGGCGCCTC GCATGCGCTG CGCAACAATG AGCATGTCCG CGTCGACCTG
ATCTATGGTT CGGTTTCCGA CAGGGCGAAG ATCTGGATCG ACATCGTCGG CCTCATTGTC
TTCCTCCTTC CCGCATGCCT CTATCTCACC TGGCTGTGCT GGCCTTTCTT CACGCTCTCC
TACCATCAGG GGGAAATATC GGGCAACGCC GGCGGACTGA TCCGTTGGCC CGTCAAGCTG
ATCCTCGTCG CCGGCTTCGC ACTGCTTTCC CTTCAGGGCG TTTCCGAGCT GGTCAAGCGG
ATCGCAGCCC TCACCGGCCA TATCAGCATC GATACGAAAT ACGAAAAGCC GCTGCAGTAA
 
Protein sequence
MSVLLAASRL IDSISQFMGK LSEYMVLFCC LISAGNAIVR YAFNYSSNGW LEIQWYLFAF 
VVMLGASHAL RNNEHVRVDL IYGSVSDRAK IWIDIVGLIV FLLPACLYLT WLCWPFFTLS
YHQGEISGNA GGLIRWPVKL ILVAGFALLS LQGVSELVKR IAALTGHISI DTKYEKPLQ