Gene Rleg_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3643 
Symbol 
ID8014492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3679636 
End bp3680313 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID644826206 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002977425 
Protein GI241206329 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCC TGCTCACCGA AGACAATATC GCGCTGGCCG ACGGCCTGTC GGCGATCTTG 
CGCGGCACGG GCCATGCCGT TGATGTCGTG CATGATGGTG CGTCTGCCAA TGCGGTCATC
GCCGCGGAAA ATTTCGATCT GGTGATCCTC GACCTCAACC TGCCGGAGAT GGACGGTCTC
GACGTGCTGC GCGCCATGCG CGCCCGGCAG AATCAGGCCG CCGTTCTCAT CCTGACCGCG
CGCGGCACGC CGGAAGAGCG GGTGAAGGGG CTCGATCTCG GCGCCGACGA TTATCTGATC
AAGCCCTTCG ACATTGCCGA ATTCGAGGCC CGGGTGCGCG TGCTGCTGCG CCGCCAGGCC
GGGCTGCGCT CGGCGACGGT CAGCTTCGGC GGCATCTCCT TCGATCTCAA TTCCCGCACC
TTTTCAGCAG GCGCCACTCC GCTCGATATT CCTGCTCGCG AGCTCGGTCT GCTCGAAATC
CTCTTCATGC GGGCCGGCAA GGTCGTCGCC AAGGAAGCGA TCATTCAATC GCTGACCGCC
TTCGACGACG ACATTTCCGC AAACGCCATC GAGCAATATG TCAGCCGCCT GCGTAAGCGC
CTGTCGCCGC ACGGCCTGAC CGTCAAGACC GCGCGCGGCA TCGGCTATTA TCTCGACAAG
CTGCCCGAGG CCTCATGA
 
Protein sequence
MRILLTEDNI ALADGLSAIL RGTGHAVDVV HDGASANAVI AAENFDLVIL DLNLPEMDGL 
DVLRAMRARQ NQAAVLILTA RGTPEERVKG LDLGADDYLI KPFDIAEFEA RVRVLLRRQA
GLRSATVSFG GISFDLNSRT FSAGATPLDI PARELGLLEI LFMRAGKVVA KEAIIQSLTA
FDDDISANAI EQYVSRLRKR LSPHGLTVKT ARGIGYYLDK LPEAS