Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3442 |
Symbol | |
ID | 8014316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3469578 |
End bp | 3471323 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644826006 |
Product | Citrate transporter |
Protein accession | YP_002977227 |
Protein GI | 241206131 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.739627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.715274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCG AGCAAGCATC CCTGCTGATC CTTCTGCTGG CGATGCTCAT TCTCTTCTCG CTCAATCGCA TCCGCATCGA AGTCGTCTCG ATCGCCGGCC TGCTTGGCGG TTATGCGCTC GGCCTTTATC CCGCCGATCA GATCTTCACG GGCTTCGCCA GTCCCGTCGT CATCACCGTC GTCGAGATCC TGCTGATCGT CCAGGTGCTG GCGCGCGCCA AGCTCTTCGA CAGTCTCGCT GCCCGTTTCG CGGCAGCAAG ACCCAGGGAC TTCACCGTCA TCGCCTGCAC GTCCGCGCTT GCCGGCTTCA TGTCGATCTT CATGAACAAT ATCGGCGCCT TTGCGATCAC CTTACCGGTC GCGCTACGTC TCGGCACGGT CCTGACGATC CCCCGCCGCC AGCTCGTCAT GCCGGTCTCG TTCGCGGCCC TGCTCGGCGG CCTCGTTTCG CTGATCGGCA CGCCGGCCAA CCTGCTCGTC AGCGATGCGC TCGCCAAGGC GACCGGAACC GGCTTTCACT TCTTCGATTT CGCCTATGTC GGCCTGCCGA TCGCCATCGC CGGCATTCTG CTCATCGCCT TTCGCGTGCA GCGCCTGTTT CCGGAACCCG ACGAAACACC GGTAAAAATC TCTCCGGCCG CGCGCCGCAT CGTCGTCGAG CGTCGCATCC CTGACGTCTC GCCGCTGATC GGTGTGCGAC TTTCCGATTG CCCGGTGCGT TTCGGCATCA AGCCGCATGC GCTGATCCGC GGCGACAGTT TCGTCTTCGG TCCGCTCGAC CAGTCGGTGA TCGAACCCGG CGACGTGCTG CTTGCCGAAG GCGCCGATGC GGTCTTTGCC GGCCTTGCCG CCACGCAGGC GCTGATCGCC GATGCCCATC CGCATGGCCT GCAGCCGGAT TTCACCCGTG TCGAAGCCGT CGTGATGCCG GAGAGCACGT TGGTCGGTTC GCGCGTCGGC TCGCTCGAAG TCTTCCACCA TCGCGGCATC GCGGTCGCCG CCCTTTCCAT GCGCGCGCTA CGCATCGAGG GCCGCTTCCT CGACCTGCAA TTGTCGATCG GCGATATATT GACGCTGGAG GGGCCGCGCA TTGCAATCGG CGAAGCGTTA GAGGAAAGCG AGTGCCTGCC GCTCGCCTCG ACAGCACCGA GCGAACCGGC GCCGCTCCTA TCCTGGCGGC CCTTCGCGCT CTTTGCCTGC GGCGTCGCCG CCTCGGCGTC CGGCCTGCGT CCCGACGTCG CTTTTGCCGG CGTCGTGCTC GTGCTCGCTC TGCTCAATCA CCTCAACATC CGTCAGGCGA TGGCCGATCT CAACTGGCCG ATCATCATCA TGCTGGCGGC GATGATCCCG ATCGGCCAAG CGGTGGCGAC CACCGGAGCG GCCGAAACCA TTGCCGGCTG GCTCAGCCTC GTCGTGCCGA TCACCCATCC GCTCTTCGGC ATCGCCCTCA TCCTTTTCCT GGCCATGGCA TTGACGCCTT TTGTCAACAA CGCGACGGTC GCAATCGTCC TGACCCCGAT CGCACTGGAA TTCGCAAGAG CCGGCAGGCA TGCGCCGGAC GCCTATCTGA TCGCGGTCGC CGCCGGTGCG TCGCTCGATT TCCTGACGCC CTTCGGCCAT CACAACAACA CGCTGGCAAT GGGCATCGGC GGTTACCGCT TCGGCGATTT CCTGCGCGCC GGCTGGCCGC TTGCCGTCGC AAGTTACGGC CTCGCCCTGC TTCTTACCGG TCTGTTCTGG CTGTGA
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Protein sequence | MSFEQASLLI LLLAMLILFS LNRIRIEVVS IAGLLGGYAL GLYPADQIFT GFASPVVITV VEILLIVQVL ARAKLFDSLA ARFAAARPRD FTVIACTSAL AGFMSIFMNN IGAFAITLPV ALRLGTVLTI PRRQLVMPVS FAALLGGLVS LIGTPANLLV SDALAKATGT GFHFFDFAYV GLPIAIAGIL LIAFRVQRLF PEPDETPVKI SPAARRIVVE RRIPDVSPLI GVRLSDCPVR FGIKPHALIR GDSFVFGPLD QSVIEPGDVL LAEGADAVFA GLAATQALIA DAHPHGLQPD FTRVEAVVMP ESTLVGSRVG SLEVFHHRGI AVAALSMRAL RIEGRFLDLQ LSIGDILTLE GPRIAIGEAL EESECLPLAS TAPSEPAPLL SWRPFALFAC GVAASASGLR PDVAFAGVVL VLALLNHLNI RQAMADLNWP IIIMLAAMIP IGQAVATTGA AETIAGWLSL VVPITHPLFG IALILFLAMA LTPFVNNATV AIVLTPIALE FARAGRHAPD AYLIAVAAGA SLDFLTPFGH HNNTLAMGIG GYRFGDFLRA GWPLAVASYG LALLLTGLFW L
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