Gene Rleg_3384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3384 
Symbol 
ID8014262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3399632 
End bp3400714 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID644825943 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977170 
Protein GI241206074 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.245336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCAGA CGGCAACACC TTTGACTGCC GACACCAACG ACTCCCGCCA GAGCAGACGC 
TGGCGGGAGT TGTCTTTCGT CCGGCCACTT CTCAAGTGGC TCTGGTCCTT TGCGCTGACT
CTGTTCGGCC TGGCGCTCGT CACCTTCACC ATGACGCGGC TGTCGCCGAT CGATCCAGCG
CTGCAGCTCG TCGGCGATCA CGCGAGCCAG TCGACCTACG AGGCTGCGCG TGTCGAACTC
GGGCTCGATC AGCCGCTGCC GGTGCAGTTC CTGCGTTATC TCGAAACGGC ACTCTCCGGC
AATTTCGGCC AGTCGATCTC GACAGGCCAG CCGGTGGCGA AAGATATCGC CCGCACCTTT
CCGGCGACGA TTGAGCTTGC GACCGCGGCG ATCATCCTTG GTGCTGCCAT CGGCCTTGCG
CTCGGTATTG CGGCCGCCAT GCGGCAGGGC ACATGGGTGG ATAGCGCTGC CCGCTTCGTG
TCGCTGTTCG GTTATTCCGT GCCGATCTTC TGGCTCGGGC TGCTGATGCT TCTACTCTTC
TATGCCCGCC TGCACTGGGC ACCAGGGCCT GGCCGGGCGG ACGTCGTCTT TCAGTACACG
GTCAAGCCGA TCTCCGGCTT TGCGCTGATC GATACATGGA TGTCCGGCAA GACAGGTGCC
TTCAGGGACG CGTTGGCGCA TCTGGCGCTG CCGGCGATCG TGCTCGCCTT CCATGCGCTT
GCCGCGATCT CGCGGCTGAC GCGGGCGGCG ATCCTCACCG AGCTCGGACA GGAATATGTG
ACGACGGCCC GTGCCAAGGG CGCCAGCCTT AGCCGTATTA CCTTCATCCA CATCATGCCC
AATATAGCGG GTACGCTGCT GACCGTGATC GCGCTTTCCT ATGCGAGCCT GCTCGAAGGC
GCGGTGCTGA CCGAGACCGT CTTTGCCTGG CCGGGCATCG GCCGTTACCT CACGACGGCG
ATGTTTGCCG GCGACATGCC AGCGATCCTC GGCGCCACAC TCGTCGTCGG CGCGTCCTTC
GTGCTGCTCA ATGCGCTGAC CGATCTCGGC GTCTCGCGCC TCGATGCGGG GAGGCGGCGA
TGA
 
Protein sequence
MPQTATPLTA DTNDSRQSRR WRELSFVRPL LKWLWSFALT LFGLALVTFT MTRLSPIDPA 
LQLVGDHASQ STYEAARVEL GLDQPLPVQF LRYLETALSG NFGQSISTGQ PVAKDIARTF
PATIELATAA IILGAAIGLA LGIAAAMRQG TWVDSAARFV SLFGYSVPIF WLGLLMLLLF
YARLHWAPGP GRADVVFQYT VKPISGFALI DTWMSGKTGA FRDALAHLAL PAIVLAFHAL
AAISRLTRAA ILTELGQEYV TTARAKGASL SRITFIHIMP NIAGTLLTVI ALSYASLLEG
AVLTETVFAW PGIGRYLTTA MFAGDMPAIL GATLVVGASF VLLNALTDLG VSRLDAGRRR