Gene Rleg_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3143 
Symbol 
ID8014046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3142696 
End bp3143838 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID644825709 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_002976937 
Protein GI241205841 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.325182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC CGCTCACCAT CGCTGACCTG AAAAAACTCG CACGGCGCCG TGTGCCGAAG 
ATGTTTTTCG ACTATGCGGA TTCGGGTGCC TGGACGGAAT CGACCTATGC AGCGAACGAG
AGCGATTTCA GCCAGATCAA GCTGCGCCAG CGAGTGATGG TCGACATGAC CAACCGCACA
CTGGCGACGA CGATGATCGG CCAGAAAGTG TCGATGCCGG TGGCGCTGGC GCCAACCGGC
CTGACCGGCA TGCAACATGC CGATGGCGAG ATGCTGGCGG CACGCGCCGC CGAGGAGTTC
GGCGTTCCCT TCACGCTTTC GACGATGAGC ATCTGCTCGA TCGAGGACGT GGCGTCAGCG
ACGACGCGCC CCTTCTGGTT CCAACTCTAC GTGATGAGGG ACAAGGATTT CGTCGTCAAC
CTCATCAACC GCGCCAAGGC CGCCGGATGC TCGGCACTGG TGTTGACCGC CGATCTGCAG
ATCCTCGGCC AGCGGCATAA GGATCTGCGC AACGGCCTGT CGGCGCCGCC GAAATTCACC
CCGAAACACG TCTGGCAGAT GGCGACCCGG CCCTTCTGGT GCCTGGACAT GCTGCAGACC
AAGCGCCGCA ACTTCGGCAA TATCGTTGGC CATGCGAAAA ATGTCACCAA TATCGCCTCG
CTCTCCGCAT GGACGCACGA GCAGTTCGAT CCGCGGCTGT CCTGGGCGGA TGTCGCCTGG
ATCAAGGAAC AATGGGGCGG CCCGCTGATC ATCAAGGGCA TACTCGATCC GGAGGATGCG
AAGGCAGCCG CCGACACCGG CGCCGATGCG ATCGTCGTCT CCAATCATGG CGGGCGCCAG
CTTGACGGCG CCCCCTCCTC GATCAGCATG CTGCCGAAGA TCGTCGATGC CGTCGGCGAC
CGTATCGAGA TCCATCTCGA CGGCGGCATC CGCTCCGGCC AGGACGTGCT GAAGGCCGTG
GCACTCGGCG CCAAAGGTAC CTATATCGGC CGCCCCTTCC TTTATGGTCT CGGCGCCATG
GGCAAGGAAG GCGTATCGCT GGCACTCGGC ATCATCCGCA AGGAGATGGA CATCACCATG
GCGCTCTGCG GCAAGCGCGA CATCAACGAT GTGAATTCTT CGATCATCGA CGGCCGGCAG
TAA
 
Protein sequence
MAAPLTIADL KKLARRRVPK MFFDYADSGA WTESTYAANE SDFSQIKLRQ RVMVDMTNRT 
LATTMIGQKV SMPVALAPTG LTGMQHADGE MLAARAAEEF GVPFTLSTMS ICSIEDVASA
TTRPFWFQLY VMRDKDFVVN LINRAKAAGC SALVLTADLQ ILGQRHKDLR NGLSAPPKFT
PKHVWQMATR PFWCLDMLQT KRRNFGNIVG HAKNVTNIAS LSAWTHEQFD PRLSWADVAW
IKEQWGGPLI IKGILDPEDA KAAADTGADA IVVSNHGGRQ LDGAPSSISM LPKIVDAVGD
RIEIHLDGGI RSGQDVLKAV ALGAKGTYIG RPFLYGLGAM GKEGVSLALG IIRKEMDITM
ALCGKRDIND VNSSIIDGRQ