| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3105 |
|---|
| Symbol | |
|---|
| ID | 8014013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3105053 |
|---|
| End bp | 3105970 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644825672 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002976900 |
|---|
| Protein GI | 241205804 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.238767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.85069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCA ACCCCGCAAA GCGAGAATTG CTCGCCCAGG AACTGCTGGA GGCGGAAGGC
CTTGCGCCCG AAAGCCGCTC GCTCACCAAG GATGCCTTGC GTCGCCTCGG GCGCAACAAG
GCGGCCGTCC TGTCGATCGT CGTCCTGACG CTTTTGATCC TCGTCGCCTT CATCGGCCCC
TGGTTCATTC CCTTCAACTA TGAGGATCCT GATTGGGCGG CTTTCCGCAT ACCCCCCTCG
ATCGAAACCG GCCACTATTT CGGCACCGAC CCGAACGGCC GCGACCTTCT CGCCCGCGTC
CTTTACGGCA CCCGCGTCTC GCTGGCGGTG GCGCTGACGG CGACCGTCGT CTCCGTCTTC
ATCGGCGTGC TCTACGGTGC GGTATCGGGT TATATCGGCG GCAGGCTGGA TGCGATCATG
ATGCGCTTCG TCGATATCAT GTATGCGCTT CCCTATATCC TCTTCGTCAT CCTGCTGATG
GTGATCTTCG GCCGCAACGT CTATCTGCTG TTTGCCGCCA TCGGCGCGCT GGAATGGCTG
ACGATGGCCC GCATCGTGCG TGGCCAGACG CTGTCGATCA AGCATCGCGA ATTCATCGAA
GCGGCCCGCG CATCCGGACA GCGGCCGTTC AAGATCATCA TCAAGCACAT CATCCCGAAC
CTCGTCGGCC CGGTGGTGAT TTTCGCGGCG CTGACGGTGC CTGAGATCAT TGCCACCGAA
AGCTTCCTTT CCTATCTCGG CTTCGGCGTG CAGGAACCGC TGACCTCGCT CGGCACGCTG
ATCGCCGAGG GGACCGATGC CATGGAAAGC ATGCCGTGGC TGCTGGTCTT CCCGGCGAGC
TTTCTTGTGG CGCTGCTGCT CAGCCTGCTC TTCATCGGCG ACGGGCTGCG CGACGCGTTC
GACCCGAAGG ATCGTTAA
|
|---|
| Protein sequence | MILNPAKREL LAQELLEAEG LAPESRSLTK DALRRLGRNK AAVLSIVVLT LLILVAFIGP
WFIPFNYEDP DWAAFRIPPS IETGHYFGTD PNGRDLLARV LYGTRVSLAV ALTATVVSVF
IGVLYGAVSG YIGGRLDAIM MRFVDIMYAL PYILFVILLM VIFGRNVYLL FAAIGALEWL
TMARIVRGQT LSIKHREFIE AARASGQRPF KIIIKHIIPN LVGPVVIFAA LTVPEIIATE
SFLSYLGFGV QEPLTSLGTL IAEGTDAMES MPWLLVFPAS FLVALLLSLL FIGDGLRDAF
DPKDR
|
|---|
| |