Gene Rleg_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3072 
Symbol 
ID8013982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3069678 
End bp3070262 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content59% 
IMG OID644825640 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionYP_002976868 
Protein GI241205772 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.142263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG AAGACCAGGA CGACAAGACG AAGGAACTGC CGCTCGGCAA GGAAACGGAG 
GCGAATCTTT TCAAGTCGCG TTCGATCTTC ATCTACGGAC CGATCAATCA GGAATTGGCG
CAGAAGGTCT GCTCGCAGCT TGTGGCACTT GCCGCGGCCA GCGACGAGGA CATCCGCATC
TATGTCAATT CGCCCGGTGG CCACGTCGAA TCCGGCGATT CCATTCATGA CATGATCAAG
TTCATCAAGC CGAAGGTCTG GATGATCGGC ACCGGTTGGG TCGCCTCCGC TGGCGCGCTG
ATCTATGTCG CCACTCCGAA GGAGCGGCGC CTGTGCCTGC CGAACACGCG CTTCCTGCTG
CATCAGCCCT CCGGCGGCAC GCGCGGCATG GCATCCGACA TCGAAATCCA GGCGCGCGAG
ATCATCAAGA TGAACGAGCG CTTGAACAGG ATCATGGCAG CGGCCACCGG CCAGCCGCTC
GACAAGATCG ACAAGGATAC GGATCGCGAC TACTGGCTTT CGGCCGAAGA GGCGAAGGAG
TATGGCCTCG TTTCACGGAT CGTGACGTCG CAGGCCGATA TCTAA
 
Protein sequence
MNDEDQDDKT KELPLGKETE ANLFKSRSIF IYGPINQELA QKVCSQLVAL AAASDEDIRI 
YVNSPGGHVE SGDSIHDMIK FIKPKVWMIG TGWVASAGAL IYVATPKERR LCLPNTRFLL
HQPSGGTRGM ASDIEIQARE IIKMNERLNR IMAAATGQPL DKIDKDTDRD YWLSAEEAKE
YGLVSRIVTS QADI