Gene Rleg_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2972 
Symbol 
ID8013894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2964585 
End bp2965361 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID644825542 
Productresponse regulator receiver protein 
Protein accessionYP_002976770 
Protein GI241205674 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0213987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCACC TCTTCTTGCA ATCCACGCTT CGCGAATTGC AGGTCTTTCT CCACTCCCGG 
CGTTTCTGGG GAACCTTTGC CGCGATCGTC CTGCTCTTTG CCGTCACCGG CCCCTACGGC
ACGATGGAAA ACATGGCCTT CGGCGAACGC CTCGCCTATT GGCTGAGCCT GCATGCCCTT
GCCTGGGTGA TCGCCATCCT CTGCGCGGTT GCGGCCGAAA GACTGCTGCG GGGATTGATC
GTTTCCATGT TCGCCCGGAT GATGGCGGGT TCGCTCATAG CCGCCCTGCC GATCGGTTTT
GCCATCGGCC TCGTCGACTA TGTCTTCACC GGCGAAGCGA CCACGCTCGA AAGCGGCCTG
CAGCGCGCGC TTTTTGCGGT ACCGCTCTGC GCCCTCTTCT GCCTTTTGAC CTACATGGCG
ATGAGCCAGA AAATCGCCGA AGCCGCAGCG CCTCAGGAAA CCAGCCCCGG CGCCTCGATC
CTCGACCGGC TGAAGCCTGA GAATCGTGGC TCGCTGCTGC GCCTTTCCGT TCAGGACCAC
TATACCGAGG TGGTGACCAG CCGCGGGCGC GAACTGGTGC TCTTACGTTT CGCCGATGCG
CTTAGGGAAA CCGCCGCGAC GCCGGGCCTT CGCGTCCATC GCTCGCACTG GGTGGCCGAC
GCCCATGTCG AAAGCTTGAA GCGCGACAAT GGCAGGCTGC TGATCCTCAC CCGCGACGGC
AAGGCAATCC CGGTCAGCCG TAGCTATGCC GGGGAAGTGC GCCGCCGCTT CACGTAA
 
Protein sequence
MIHLFLQSTL RELQVFLHSR RFWGTFAAIV LLFAVTGPYG TMENMAFGER LAYWLSLHAL 
AWVIAILCAV AAERLLRGLI VSMFARMMAG SLIAALPIGF AIGLVDYVFT GEATTLESGL
QRALFAVPLC ALFCLLTYMA MSQKIAEAAA PQETSPGASI LDRLKPENRG SLLRLSVQDH
YTEVVTSRGR ELVLLRFADA LRETAATPGL RVHRSHWVAD AHVESLKRDN GRLLILTRDG
KAIPVSRSYA GEVRRRFT