Gene Rleg_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2942 
Symbol 
ID8013868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2934083 
End bp2934754 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID644825512 
Productprotein of unknown function DUF922 
Protein accessionYP_002976740 
Protein GI241205644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5664] Predicted secreted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.164247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG CGTTGAAAGC GGCGACCGCT CCCGTTAGGT TCGGCCCGAA ACATCATTCG 
GCGGAGCCGC GCGTGACGAC AAATTTTCTA TCCTGTGTGC TTGCGGCGGT TTTCACGTCG
GTGCCGGCCG TGGCGCTGGC CGAGTGGCAG GCGGTCGAAG AGGTGCGGCC CTATTCGATA
TCAGGCACCT CGGGCGCCGG GCTTTATGAA TCGATCGGCG AGCGTGGCCC GAAGGCGGGC
GGCTTCGGCC GGGCAATCGC GCATACGACG TTCAAGCTGA CCTGGACCAG GAAATACGAA
CCGCAGGGAA ATGCCTGCGT TATCGTCACC AACCTGCCGA AGCTCATCAT CACCTATACG
CTGCCGAAAC CATCTGCTGC TCTGCCAGCT GCCGTGAAGA GCAGCTGGGA GGCCTTCATA
TCAGGTGTGC AGGCGCATGA GCGGGTGCAT GGCGAGACCA TCAAGGAGAT GGTCAAGGAG
ATCGAGGCGA CAAGCATCGG CCTCACCGTT GCCGATGATC CCGATTGCAA GAAGATCAGG
ATCGAGCTGA CCCGCCGGCT CGGCGAGATC TCCCAAAGAC AGCGCCAGCG CGGCCGCGAC
TTCGACAAGA TCGAAATGGG TGACGGCGGC AATATCCAGC AGCTCATCCT CAAGCTGGTC
AATGGTCCCT GA
 
Protein sequence
MHDALKAATA PVRFGPKHHS AEPRVTTNFL SCVLAAVFTS VPAVALAEWQ AVEEVRPYSI 
SGTSGAGLYE SIGERGPKAG GFGRAIAHTT FKLTWTRKYE PQGNACVIVT NLPKLIITYT
LPKPSAALPA AVKSSWEAFI SGVQAHERVH GETIKEMVKE IEATSIGLTV ADDPDCKKIR
IELTRRLGEI SQRQRQRGRD FDKIEMGDGG NIQQLILKLV NGP