Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2942 |
Symbol | |
ID | 8013868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2934083 |
End bp | 2934754 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644825512 |
Product | protein of unknown function DUF922 |
Protein accession | YP_002976740 |
Protein GI | 241205644 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5664] Predicted secreted Zn-dependent protease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.164247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATGACG CGTTGAAAGC GGCGACCGCT CCCGTTAGGT TCGGCCCGAA ACATCATTCG GCGGAGCCGC GCGTGACGAC AAATTTTCTA TCCTGTGTGC TTGCGGCGGT TTTCACGTCG GTGCCGGCCG TGGCGCTGGC CGAGTGGCAG GCGGTCGAAG AGGTGCGGCC CTATTCGATA TCAGGCACCT CGGGCGCCGG GCTTTATGAA TCGATCGGCG AGCGTGGCCC GAAGGCGGGC GGCTTCGGCC GGGCAATCGC GCATACGACG TTCAAGCTGA CCTGGACCAG GAAATACGAA CCGCAGGGAA ATGCCTGCGT TATCGTCACC AACCTGCCGA AGCTCATCAT CACCTATACG CTGCCGAAAC CATCTGCTGC TCTGCCAGCT GCCGTGAAGA GCAGCTGGGA GGCCTTCATA TCAGGTGTGC AGGCGCATGA GCGGGTGCAT GGCGAGACCA TCAAGGAGAT GGTCAAGGAG ATCGAGGCGA CAAGCATCGG CCTCACCGTT GCCGATGATC CCGATTGCAA GAAGATCAGG ATCGAGCTGA CCCGCCGGCT CGGCGAGATC TCCCAAAGAC AGCGCCAGCG CGGCCGCGAC TTCGACAAGA TCGAAATGGG TGACGGCGGC AATATCCAGC AGCTCATCCT CAAGCTGGTC AATGGTCCCT GA
|
Protein sequence | MHDALKAATA PVRFGPKHHS AEPRVTTNFL SCVLAAVFTS VPAVALAEWQ AVEEVRPYSI SGTSGAGLYE SIGERGPKAG GFGRAIAHTT FKLTWTRKYE PQGNACVIVT NLPKLIITYT LPKPSAALPA AVKSSWEAFI SGVQAHERVH GETIKEMVKE IEATSIGLTV ADDPDCKKIR IELTRRLGEI SQRQRQRGRD FDKIEMGDGG NIQQLILKLV NGP
|
| |