Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2880 |
Symbol | |
ID | 8013815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2874379 |
End bp | 2876028 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644825450 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_002976679 |
Protein GI | 241205583 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.824373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTC AGTTCATCTA TCATATGTCC GGCCTCAACA AGGCCTATGG CAACAAGAAG ATCCTGGAGA ATATCCACCT TTCGTTCTAC CCCGATGCCA AGATCGGTAT CCTCGGTCCG AACGGCGCGG GTAAATCCAC CGTACTGCGC ATCATCGCGG GCCAGGACAA GGAGTATACC GGCGAAGCCT GGCTCGCCGA AGGTGCGACG GTCGGCTACC TCGAGCAGGA GCCGCACCTC GATGCAAACA AGACGGTGTT CGAGAACGTC ATGGAAGGCG TTGCCTCGAA GACGGCTGTC CTCGATCGCT ACAACGAATT GATGATGAAC TATTCCGATG AGACGGCGGA AGAGGGCGCC AAGCTTCAGG ACGTCATCGA CAGCCAGAAC CTCTGGGATC TGGAAAGCCA GGTCGAAATG GCGATGGAAG CGCTACGCTG CCCGCCGCGT GACGCCGATG TCACCAGCCT TTCGGGTGGT GAGCGACGCC GTGTCGCGCT CTGCCGCCTG CTGCTTTCGC AGCCGGATCT GCTGCTGCTC GACGAACCGA CCAACCACCT GGACGCCGAA ACCATCGCCT GGCTCGAAAA ACATCTGCGC GACTATCCGG GCGCCGTGAT GATGATTACC CACGATCGCT ACTTCCTGGA CAACGTCACC GGCTGGATCC TCGAACTCGA CCGCGGCCGT GGCATTCCCT ACGAAGGCAA CTATTCGGCC TACCTGCAGG CGAAAGCCAA GCGGATGCTG CAGGAAAGCC GCGAAGATGC ATCGCGCCAG AAGGCGATCA GCCGCGAACA GGAATGGATC GCGTCCAGCC CGAAAGCCCG TCAGGCCAAG TCCAAGGCGC GTATCAAGTC CTACGAGCAG TTGGTGGATG CCGCCGAGAA GCAGCGTCCC GGCGACGCAC AGATCATCAT CCCGGTCAGC GAGCGCCTCG GCCAGGTGGT CATCGAGATG GACGGCATCA CCAAGGGCTT CGAGGGCCGC ACGCTGATCA ACGACCTGTC GATCAAGCTG CCGCCAGGCG GCATCGTCGG CATCATCGGC CCGAACGGCG CCGGTAAGAC GACGCTATTC AGGATGATCA CTGGCCAGGA AACGCCGGAT GGCGGTTCGA TCCGCATCGG CGAGACCGTG CATCTCGGTT ATGTCGACCA GAGCCGTGAC ACCCTTGCGG CCGACAAGAC GGTCTGGGAG GAAATCTCCG GCGGCGCCGA AATCATCAAG CTTGGTAAGT TCGACATGAA CTCCCGTGCC TATTGCGGCG CCTTTAACTT CAAGGGCGGC GACCAGCAGC AGAAGGTCGG CAATCTCTCT GGTGGTCAGC GCAACCGTGT TCACCTTGCC AAGATGCTGA AGGCCGGCGG CAACGTTCTG CTGCTCGACG AACCGACCAA CGACCTCGAT ACGGAAACGC TGGGTGCCTT GGAAAACGCG CTGGAGAACT TTGCCGGCTG CGCCATCATC ATCAGCCACG ATCGCATGTT TCTCGACCGT CTGGCGACGC ATATCCTGGC TTTCGAAGGC GACGGCCATG TCGAATGGTT CGAAGGCAAC TTCGAGGATT ATGAACAGGA CAAGGTTCGC CGTCTCGGCC CCGACGCCCT CAACCCGGGC AGCCAGGCTC ACAAGCGCCT GACCCGCTGA
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Protein sequence | MARQFIYHMS GLNKAYGNKK ILENIHLSFY PDAKIGILGP NGAGKSTVLR IIAGQDKEYT GEAWLAEGAT VGYLEQEPHL DANKTVFENV MEGVASKTAV LDRYNELMMN YSDETAEEGA KLQDVIDSQN LWDLESQVEM AMEALRCPPR DADVTSLSGG ERRRVALCRL LLSQPDLLLL DEPTNHLDAE TIAWLEKHLR DYPGAVMMIT HDRYFLDNVT GWILELDRGR GIPYEGNYSA YLQAKAKRML QESREDASRQ KAISREQEWI ASSPKARQAK SKARIKSYEQ LVDAAEKQRP GDAQIIIPVS ERLGQVVIEM DGITKGFEGR TLINDLSIKL PPGGIVGIIG PNGAGKTTLF RMITGQETPD GGSIRIGETV HLGYVDQSRD TLAADKTVWE EISGGAEIIK LGKFDMNSRA YCGAFNFKGG DQQQKVGNLS GGQRNRVHLA KMLKAGGNVL LLDEPTNDLD TETLGALENA LENFAGCAII ISHDRMFLDR LATHILAFEG DGHVEWFEGN FEDYEQDKVR RLGPDALNPG SQAHKRLTR
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