Gene Rleg_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2880 
Symbol 
ID8013815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2874379 
End bp2876028 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content61% 
IMG OID644825450 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_002976679 
Protein GI241205583 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.824373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTC AGTTCATCTA TCATATGTCC GGCCTCAACA AGGCCTATGG CAACAAGAAG 
ATCCTGGAGA ATATCCACCT TTCGTTCTAC CCCGATGCCA AGATCGGTAT CCTCGGTCCG
AACGGCGCGG GTAAATCCAC CGTACTGCGC ATCATCGCGG GCCAGGACAA GGAGTATACC
GGCGAAGCCT GGCTCGCCGA AGGTGCGACG GTCGGCTACC TCGAGCAGGA GCCGCACCTC
GATGCAAACA AGACGGTGTT CGAGAACGTC ATGGAAGGCG TTGCCTCGAA GACGGCTGTC
CTCGATCGCT ACAACGAATT GATGATGAAC TATTCCGATG AGACGGCGGA AGAGGGCGCC
AAGCTTCAGG ACGTCATCGA CAGCCAGAAC CTCTGGGATC TGGAAAGCCA GGTCGAAATG
GCGATGGAAG CGCTACGCTG CCCGCCGCGT GACGCCGATG TCACCAGCCT TTCGGGTGGT
GAGCGACGCC GTGTCGCGCT CTGCCGCCTG CTGCTTTCGC AGCCGGATCT GCTGCTGCTC
GACGAACCGA CCAACCACCT GGACGCCGAA ACCATCGCCT GGCTCGAAAA ACATCTGCGC
GACTATCCGG GCGCCGTGAT GATGATTACC CACGATCGCT ACTTCCTGGA CAACGTCACC
GGCTGGATCC TCGAACTCGA CCGCGGCCGT GGCATTCCCT ACGAAGGCAA CTATTCGGCC
TACCTGCAGG CGAAAGCCAA GCGGATGCTG CAGGAAAGCC GCGAAGATGC ATCGCGCCAG
AAGGCGATCA GCCGCGAACA GGAATGGATC GCGTCCAGCC CGAAAGCCCG TCAGGCCAAG
TCCAAGGCGC GTATCAAGTC CTACGAGCAG TTGGTGGATG CCGCCGAGAA GCAGCGTCCC
GGCGACGCAC AGATCATCAT CCCGGTCAGC GAGCGCCTCG GCCAGGTGGT CATCGAGATG
GACGGCATCA CCAAGGGCTT CGAGGGCCGC ACGCTGATCA ACGACCTGTC GATCAAGCTG
CCGCCAGGCG GCATCGTCGG CATCATCGGC CCGAACGGCG CCGGTAAGAC GACGCTATTC
AGGATGATCA CTGGCCAGGA AACGCCGGAT GGCGGTTCGA TCCGCATCGG CGAGACCGTG
CATCTCGGTT ATGTCGACCA GAGCCGTGAC ACCCTTGCGG CCGACAAGAC GGTCTGGGAG
GAAATCTCCG GCGGCGCCGA AATCATCAAG CTTGGTAAGT TCGACATGAA CTCCCGTGCC
TATTGCGGCG CCTTTAACTT CAAGGGCGGC GACCAGCAGC AGAAGGTCGG CAATCTCTCT
GGTGGTCAGC GCAACCGTGT TCACCTTGCC AAGATGCTGA AGGCCGGCGG CAACGTTCTG
CTGCTCGACG AACCGACCAA CGACCTCGAT ACGGAAACGC TGGGTGCCTT GGAAAACGCG
CTGGAGAACT TTGCCGGCTG CGCCATCATC ATCAGCCACG ATCGCATGTT TCTCGACCGT
CTGGCGACGC ATATCCTGGC TTTCGAAGGC GACGGCCATG TCGAATGGTT CGAAGGCAAC
TTCGAGGATT ATGAACAGGA CAAGGTTCGC CGTCTCGGCC CCGACGCCCT CAACCCGGGC
AGCCAGGCTC ACAAGCGCCT GACCCGCTGA
 
Protein sequence
MARQFIYHMS GLNKAYGNKK ILENIHLSFY PDAKIGILGP NGAGKSTVLR IIAGQDKEYT 
GEAWLAEGAT VGYLEQEPHL DANKTVFENV MEGVASKTAV LDRYNELMMN YSDETAEEGA
KLQDVIDSQN LWDLESQVEM AMEALRCPPR DADVTSLSGG ERRRVALCRL LLSQPDLLLL
DEPTNHLDAE TIAWLEKHLR DYPGAVMMIT HDRYFLDNVT GWILELDRGR GIPYEGNYSA
YLQAKAKRML QESREDASRQ KAISREQEWI ASSPKARQAK SKARIKSYEQ LVDAAEKQRP
GDAQIIIPVS ERLGQVVIEM DGITKGFEGR TLINDLSIKL PPGGIVGIIG PNGAGKTTLF
RMITGQETPD GGSIRIGETV HLGYVDQSRD TLAADKTVWE EISGGAEIIK LGKFDMNSRA
YCGAFNFKGG DQQQKVGNLS GGQRNRVHLA KMLKAGGNVL LLDEPTNDLD TETLGALENA
LENFAGCAII ISHDRMFLDR LATHILAFEG DGHVEWFEGN FEDYEQDKVR RLGPDALNPG
SQAHKRLTR