Gene Rleg_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2876 
Symbol 
ID8015731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2869574 
End bp2870791 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID644825446 
Productlytic murein transglycosylase 
Protein accessionYP_002976675 
Protein GI241205579 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.139768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCT CGCTCGCAAG CTGCTCTGCA CTCGCCCTCC TGTTTGCGCT TGCCCTCGCC 
GGCGTCGCGG CCGCCCAGCA GGCGCCTGAC GCAGCCCCGG CCGCACCCTG CGGCGGCGAT
CTGTCCGCCT TCCTCGAAGG TGTCAAGAAA GACGCAGTCG CAGCCGGCGC CAGTGCGGCA
GCCGCCGACG AGGCCTTCGC CGGCGCCGAG ATCGACCCCA AGGTCCTGAG CCGGGATCGC
GCCCAGGGCG TCTTCAAGCA GACCTTCCTC GAATTCTCCC AGCGCACCGT CAGCCAGGCC
CGCCTCGACA TCGGCCGCCA GAAGATGAAG CAATATGCCG ACGTCTTTGC CCGCGCCGAG
CAGGATTTCG GCGTGCCCCC GGGCGTCATC ACCGCCTTCT GGGCGATGGA AACCGATTTC
GGCGCCGTCC AGGGCGATTT CAACACCCGC AACGCTCTTG TGACGCTGTC GCATGATTGC
CGTCGCCCGG AACTCTTCCG TCCGCAGCTG ATCGCTCTTA TTGAGATGGT CCAGCACGGC
GACCTCGACC CCGCCACCAA TACCGGCGCC TGGGCCGGCG AGATCGGCCA AGTGCAAATG
CTGCCGCGCG ACATCATTGC CTATGGCATG GATGGCGACG GCGACGGTCA TATCCGCCTG
AAGCAGAGCG GCCCGGACGC CATCCTGACG GCGGCGAAAT TCATCCAGCA CCTCGGCTTC
GAGCGCGGCC AGCCCTGGCT GCAGGAAGTG ACCGTGCCCG ATAACCTGCC CTTTGAGAAG
TCCGGTCTTG GCGGCACGAT GAAAGCGGGA GAATGGTTCG CGCTCGGCGT CAAGCCGCGC
GACGGCAATA CCGCCTTCGG CAACTTGGAA GGCGATCTCG TTCTGCCACA AGGCCGCATG
GGACCGGCTT TTATCGCCTA TCCCAATTTC AAGATCTATC TCGAATGGAA CAAGTCGTTC
ATCTACACGA CCTCGGCCGC CTATTTCGGG ACACGCCTTT CGGGCGCCGA ACCCTATCTC
AAGGGCGTGC CGGAACAGGG GCTTGCCAGC GACCAGATGA AGGCGCTGCA GACCAAACTG
CAGTCGCTCG GCCATGATGT CGGCGAGATC GACGGTATCC TCGGCTCCGG CACACGTGTC
GCGATCCAGA AGGAACAGCA GCGCCTCGGC ATGCCGGCCG ACGGCTGGGC GACGCCTGCC
CTCCTCAACG CCCTCTGA
 
Protein sequence
MHRSLASCSA LALLFALALA GVAAAQQAPD AAPAAPCGGD LSAFLEGVKK DAVAAGASAA 
AADEAFAGAE IDPKVLSRDR AQGVFKQTFL EFSQRTVSQA RLDIGRQKMK QYADVFARAE
QDFGVPPGVI TAFWAMETDF GAVQGDFNTR NALVTLSHDC RRPELFRPQL IALIEMVQHG
DLDPATNTGA WAGEIGQVQM LPRDIIAYGM DGDGDGHIRL KQSGPDAILT AAKFIQHLGF
ERGQPWLQEV TVPDNLPFEK SGLGGTMKAG EWFALGVKPR DGNTAFGNLE GDLVLPQGRM
GPAFIAYPNF KIYLEWNKSF IYTTSAAYFG TRLSGAEPYL KGVPEQGLAS DQMKALQTKL
QSLGHDVGEI DGILGSGTRV AIQKEQQRLG MPADGWATPA LLNAL