Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2844 |
Symbol | lpxC |
ID | 8015729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2832039 |
End bp | 2832995 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644825414 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_002976643 |
Protein GI | 241205547 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.587806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0075147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAATTG GCTTGCTGGG TTTTCAAACG ACGGTATCGC GTCCCGTGAC GCTTTCGGGC ACCGGGGTCC ATTCGGGCGC GGAAGTGTCG ATCACCCTGA ACCCGGCCGA ATCGGACACC GGCGTCGTTT TCCAGCGCCT GCATGACAAT GGCGACATCA CCGAACTCAA GGCCGTCTCC TCGCAGGTAG GCAATACCGA CCTCTGCACC GTGCTCGGCT TCTCGCCGGC CCATTCGGTT GCGACGATCG AGCATGTCAT GGCCGCCGTC TATGCGCTCG GCCTCGACAA TGTGGTGATC GAGGTGCAGG GCTCCGAAAT GCCGATCATG GACGGAAGCT CGCTGCCCTT CGTCGAGGCA ATCGAGCAGG TCGGTCTCGT CTCCCTCGGC GTCAAGCGCC GCTATATCCG TATCACCAAG CCGGTGCGAA TTGAGCATGG CGGCTCCTGG AGCGAATTCC GTCCTTATGA CGGTACACGC TTCGAAGTCG AAATCGATTT CGAGTGCCCG CTGATCGGCC GGCAGAAGTG GGCCGGCGAT ATGACGCCCG CCGTCTTCAA GGCCGAGCTT TCCCGCGCCC GCACCTTCGG CTTCATGCGC GATGTCGAAC GTCTCTGGGC GTCGGGCCAC GCGCTCGGGT CCTCACTCGA AAATTCCGTC GTCATCTCGG ACGACAACAC CGTCATCAAC GTCGAAGGGC TGCGTTACGC CAAGGATGAA TTCGTCCGCC ACAAGACGCT CGATGCCGTC GGCGATCTGT CCCTTGCCGG CGTCCAGTTC ATCGGTTGCT ACCGTTCCTA TCGCGGCGGT CACAAGATGA ATGCCAATGC GCTGAAGGCG CTGCTCGCCG ATTCCTCCGC CTACGAAGTG GTCGAGACGT CGACGCCGCG CCAGCGCGTC GCTGCCCGCG AACTGATCGC GGTCAGTGCT TCGGAATTCG CTCCCTGGTC GGCATGA
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Protein sequence | MAIGLLGFQT TVSRPVTLSG TGVHSGAEVS ITLNPAESDT GVVFQRLHDN GDITELKAVS SQVGNTDLCT VLGFSPAHSV ATIEHVMAAV YALGLDNVVI EVQGSEMPIM DGSSLPFVEA IEQVGLVSLG VKRRYIRITK PVRIEHGGSW SEFRPYDGTR FEVEIDFECP LIGRQKWAGD MTPAVFKAEL SRARTFGFMR DVERLWASGH ALGSSLENSV VISDDNTVIN VEGLRYAKDE FVRHKTLDAV GDLSLAGVQF IGCYRSYRGG HKMNANALKA LLADSSAYEV VETSTPRQRV AARELIAVSA SEFAPWSA
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