Gene Rleg_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2428 
Symbol 
ID8013410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2431142 
End bp2432095 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content62% 
IMG OID644825009 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002976239 
Protein GI241205143 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.443713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.627473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCAACTCAGC CCATTCGGTT GTCGTACCGA GCCTGTCCAG CAAGCGCATC 
GCCGGCACCA TCGTCGTCCT CTACGCGCTG ATCACCCTCA TCCCGCTCGT CTGGATCTTC
CTGACCAGCA TCAAGTCGCC GCCGGATTCG ATCAGCTATC CCCCGAAGAT CGTCTTTTCG
CCATCGCTCG AAGGTTATTG CAATCTGTTC ACCACGCGCA CGCGGCAGAC ACCTGATTAT
ATCGCCTCGC TGCCGGCACC GGTCGGCACC TGCGATGAGG TGACGCGCAA GCGCAACATG
GTGATAGCAG GCCCGTCAAA CTTCCTGCCG CGCTTCATCA ATTCGCTGGT GATCGCCTTC
GGCTCCACCT TCCTCGCGGT CTTCCTCGGC ACGCTCGCCG CCTATGGCTT TTCCCGCTTC
AAGATCCCGC TCGCCGACGA CCTGATGTTC TTCATCCTGT CGACGCGCAT GATGCCGCCG
ATCGCCGTCG CCATCCCGAT CTACCTGATG TATCGCGAGC TCGGCCTTTC GGACACGGCG
CTCGGCATGA TCCTGCTCTA CACCGCCGTC AACGTCTCGC TCGCCGTCTG GCTGCTCAAG
GGTTTCATCG ACGAAATCCC GCGCGAATAT GAGGAAGCGG CGATGATCGA CGGCTATACC
CGCCTGCAGG CTTTCCGCAA GGTCGTGCTG CCGCAGGCGA CCACAGGAAT TGCCGCCACC
GCAATTTTCT GCCTGATCTT CGCCTGGAAC GAATATGCCT TCGCCGCCCT TCTAACCTCG
GGCGAGGCGC AGACCGCGCC GCCCTTCATC CCGACGATCA TCGGCGAAGG CGGTCAGGAC
TGGCCGGCGG TTGCCGCCGG CACGACGATC TTCCTGATTC CGATCCTGGT CTTCACCATT
CTCCTGCGCA AACAGCTGCT GCGCGGCATC ACCTTCGGAG CCGTCCGCAA ATGA
 
Protein sequence
MSAANSAHSV VVPSLSSKRI AGTIVVLYAL ITLIPLVWIF LTSIKSPPDS ISYPPKIVFS 
PSLEGYCNLF TTRTRQTPDY IASLPAPVGT CDEVTRKRNM VIAGPSNFLP RFINSLVIAF
GSTFLAVFLG TLAAYGFSRF KIPLADDLMF FILSTRMMPP IAVAIPIYLM YRELGLSDTA
LGMILLYTAV NVSLAVWLLK GFIDEIPREY EEAAMIDGYT RLQAFRKVVL PQATTGIAAT
AIFCLIFAWN EYAFAALLTS GEAQTAPPFI PTIIGEGGQD WPAVAAGTTI FLIPILVFTI
LLRKQLLRGI TFGAVRK