Gene Rleg_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2427 
Symbol 
ID8013409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2430177 
End bp2431145 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content61% 
IMG OID644825008 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002976238 
Protein GI241205142 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.535373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.626108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCATTT CCCATTCCTC CATCGTCGAG AAGGCAGCCG ATGCGACTGC GAGGGCAACG 
CCCTCCTCGG TCGCCCGGCG CGTCCGCGGC CTCTCCGACA GGGCGATCGC CTGGCTGTTT
ATTGCGCCTG CCATCACCCT GCTCTTGGCG ATCAATATCT TCCCACTGCT TTGGGCGGTC
TATCTCTCCT TTACCAATTA CCGCGCCAAC CGGCCGAATG CGCCGGTCCT GGGCGTCGGC
CTTGGAAATT ACCAGCGCGT TCTGAACGAC CCCGATATCT GGCAAGCGAT GCAGACTACC
GCGCATTTCG TCTTCTGGAC GATCGTATTG CAGACGGTGA TCGGCTTCAC GCTCGCCTAC
CTGATCGACC GCAAGTTTCG CGGCCATGCC TTCTGGACGA CGATCATCCT GATCCCGATG
ATGCTGTCGC CCGCCGTCGT CGGCAATTTC TGGCGCTTCC TCTACGAGCC GCAGATCGGC
CTCTTCGCCT ATGCCGTGTC GATGGTGTCT GGCATCCCGA CGTCGGATAT CCAGATGCTC
GGCAATGTCT CGCTGGCGCC CTGGGCGATT ATCATCGTCG ATACCTGGAT GTGGACGCCC
TATGTGATGC TGATCTGCCT AGCCGGGCTG CGCTCGATCC CCGACTATAT CTATGAGGCG
GCCGAGGTCG ACCGCGCCTC GCCATGGCGC CAGTTCTGGT CGATCACCGT GCCGATGGCC
CTGCCCTTCA TCATGCTCGC CGTACTCTTC CGCGGCATCG AGAATTTCAA GATGTTCGAC
ATGGTGACGC TGCTCACCGG CGGCGGGCCG GGCTCGGTCA CTGAGGTCGC CTCGATCACG
CTGAAACGCG CCGCCTTCGA AAGCTGGGCG ACCGGCCGGG CCTCGGCTTT CGCCATCATC
CTCTTCGTCG CGGTGTTCGG CCTCGCTAAC ATCTACGTCA AGGCATTGAA CAAGGTGAAG
CAACGATGA
 
Protein sequence
MTISHSSIVE KAADATARAT PSSVARRVRG LSDRAIAWLF IAPAITLLLA INIFPLLWAV 
YLSFTNYRAN RPNAPVLGVG LGNYQRVLND PDIWQAMQTT AHFVFWTIVL QTVIGFTLAY
LIDRKFRGHA FWTTIILIPM MLSPAVVGNF WRFLYEPQIG LFAYAVSMVS GIPTSDIQML
GNVSLAPWAI IIVDTWMWTP YVMLICLAGL RSIPDYIYEA AEVDRASPWR QFWSITVPMA
LPFIMLAVLF RGIENFKMFD MVTLLTGGGP GSVTEVASIT LKRAAFESWA TGRASAFAII
LFVAVFGLAN IYVKALNKVK QR