| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2275 |
|---|
| Symbol | |
|---|
| ID | 8013276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 2280676 |
|---|
| End bp | 2281416 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644824860 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002976090 |
|---|
| Protein GI | 241204994 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0529078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.301367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCATG TCGATCACAT CCTGATCGTC GATGACGATC GCGAAATCCG CGAGCTGGTC
TCGGGTTATC TGCAGAAGAA CGGCCTGCGC ACGAGCGTTG CTGCCGACGG ACGGCAGATG
CGCAGTTTTG TCGAGGCCAA TGCCGTCGAC CTGATCGTGC TCGATGTGAT GATGCCCGGC
GATGACGGGC TGGTGCTGTG CCGCGAACTG CGCGCCGGCC GGCACAAGGC GATCCCTATC
CTGATGCTGA CGGCCCGCAC CGACGAGATG GACAGGATCC TCGGGCTGGA AATGGGCGCC
GACGACTATC TTCCCAAGCC CTTTGCTGCG CGTGAGCTTC TCGCCCGCAT CAAGGCGGTG
CTGCGGCGCA CGCGGATGCT GCCGCCCAAC CTGCAGATCA GCGAAGCTGG ACAGTTGCTG
ACCTTCGGCG ACTGGCGGCT CGATACGGTG GCCCGGCACC TTCTCGACAA GGAGGGGACC
GCGATTGCGC TGAGTGGCGC CGAATACCGT CTGCTTCGCG TCTTCATCGA CCATCCGCAG
CGAGTGCTCA ATCGTGACCA GCTTTTGAGC CTGACGCAGG GCCGCGACGC CGATCTCTTC
GATCGTTCGA TCGATCTTCT GGTCAGTCGC CTGCGTCAAA GGCTGGGCGA CGATGCGCGC
GAACCGACCT ATATCAAGAC GGTGCGCAGC GAAGGCTATG TGTTTTCGGT TCCGGTCGAA
ATATCGGAGC CGCGCCAATG A
|
|---|
| Protein sequence | MDHVDHILIV DDDREIRELV SGYLQKNGLR TSVAADGRQM RSFVEANAVD LIVLDVMMPG
DDGLVLCREL RAGRHKAIPI LMLTARTDEM DRILGLEMGA DDYLPKPFAA RELLARIKAV
LRRTRMLPPN LQISEAGQLL TFGDWRLDTV ARHLLDKEGT AIALSGAEYR LLRVFIDHPQ
RVLNRDQLLS LTQGRDADLF DRSIDLLVSR LRQRLGDDAR EPTYIKTVRS EGYVFSVPVE
ISEPRQ
|
|---|
| |