Gene Rleg_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2258 
Symbol 
ID8013261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2263753 
End bp2265231 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content61% 
IMG OID644824844 
ProductABC transporter related 
Protein accessionYP_002976074 
Protein GI241204978 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0621772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0357164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATC CAGTTCTTTC CCTGAGGGGC ATATCCAAAT GGTATGGGCC GCTCCAGGTT 
CTGAAGAATG TCAGCTTGGA CGTTTATCCC GGCGAAGTGG TTGCACTTCT CGGTGAAAAC
GGCGCAGGCA AGTCAACGCT ATCGGGCATT ATCGCCGGGT CACGCACGCC GTCCGAAGGA
TCAATGACAT GGCTGGGGCA GCCTTATGCC CCGGCCACCC CAAGGGAAGC GATCGACAAG
GGCGTTGTCC TGATCCATCA GGAGCTGCAG CTTCTGCCGC AGCTGTCGAT CGCGGAAAAC
GTCTTCATCG GACGTTGGCC GATGAAGAAC GGCGTCGTCG ACCGCGCCCA GATGGTTCGC
CGGGCCCAGG ACCAGCTCGC TCGCTTGAAC CTTCACATCC CTGCAACGCG GACGGTCGCC
GGCCTTTCCA CGGCAAATCA GCAACTCATC GAGATCGCCA AGGCGCTGGC TCTCAACGCA
AAGCTCCTGA TCCTCGATGA GCCGACGGCC GCCCTTGGCG GCGCGGAGAC GGAAGCTCTT
TTCGAACAGG TTCGGAAGCT TCGCTCAGAA GGTGTCGGCA TCGTCTACAT TTCCCACCGC
ATGGAAGAGA TCAAGCGAAT AACCGATCGG ATCGTCGTTC TTCGCGATGG CGAGCGCGTG
CAGGAATTCT CCGACAGCGC GACACCGGTG CGAACGATCG TCGAGAGCAT GGTCGGACGC
CCGCTTGACC GCTTGTTCCC TGCCCTGCCG GTTCCGACAG AGCATCCAGT ACTCCAGGTG
TCGGGGCTGT GCTCGCCGGA CAACTCGTTC CGTGACGTTA CCTTCGAGGT CCGGGCCGGG
GAAATTCTGG GGATCGCCGG ATTGGTCGGC GCCGGCCGCA CCGAACTGGT GCGTGCGATT
TCGGGAGCAG ATCCAATCAG TGCTGGGTCG ATCAAGCTGG AAGGCGAGGA ACTGAGGCTG
CGAGATCCGG CGGACGCGAT CGCCAAGGGT ATCGTGATGG TTCCGGAAGA CCGCAAGGAG
CAGGGCCTGA TCGTCGGGCA CCGGATCAGC GAGAACATTA TCTACGCCAA TCTCGACAAG
CTGGGCGGGC GTTGGATTAC GCCGAGCGTC AAGCGCTCGT TTGCGGAGAA GGCAGTGGCC
AAGTTCGGCG TGAAGGGCCG TGCGGAGCAA TATGCCTCGG ACCTGTCCGG CGGCAACCAG
CAGAAGGTGG TCATCGCGAA ATGGCTGATG CGCGATCCTA AGGTCGTCGT GCTCGACGAA
CCGACGAGAG GCATCGACGT CGGCGCCCGA GCCGGTATCT ACGACATCAT CGTCAATCTT
GCCAAACGGG GCGTGGCGGT CATCGTCGTA AGCTCGGACC TCGAGGAAGT TCTCGGAGTC
TCCAATCGCA TTCTCGTGCT TGCGCAAGGC AAGCAGGCGG GGATTCTCAA TCGTGACCAG
GCAAATGACG TTTCGGTCAT GGAACTGGCC ACCATCTAA
 
Protein sequence
MTDPVLSLRG ISKWYGPLQV LKNVSLDVYP GEVVALLGEN GAGKSTLSGI IAGSRTPSEG 
SMTWLGQPYA PATPREAIDK GVVLIHQELQ LLPQLSIAEN VFIGRWPMKN GVVDRAQMVR
RAQDQLARLN LHIPATRTVA GLSTANQQLI EIAKALALNA KLLILDEPTA ALGGAETEAL
FEQVRKLRSE GVGIVYISHR MEEIKRITDR IVVLRDGERV QEFSDSATPV RTIVESMVGR
PLDRLFPALP VPTEHPVLQV SGLCSPDNSF RDVTFEVRAG EILGIAGLVG AGRTELVRAI
SGADPISAGS IKLEGEELRL RDPADAIAKG IVMVPEDRKE QGLIVGHRIS ENIIYANLDK
LGGRWITPSV KRSFAEKAVA KFGVKGRAEQ YASDLSGGNQ QKVVIAKWLM RDPKVVVLDE
PTRGIDVGAR AGIYDIIVNL AKRGVAVIVV SSDLEEVLGV SNRILVLAQG KQAGILNRDQ
ANDVSVMELA TI