Gene Rleg_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2219 
Symbol 
ID8013228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2222798 
End bp2223859 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID644824805 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_002976035 
Protein GI241204939 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0289807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.425963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGATA CCATTGACGA TCTGCGTATC GTCGAAATTA CCCCCCTGAC CAAGCCTGCC 
GATATCATCG CGGAAATTTC CCGCAATGCG GATGTCAGCA AGACCGTGAC CATCAATCGT
GAGGCGATCC GTAAAATTCT CCAGGGCGAA GACGATCGGC TGATCGTCGT CATCGGCCCC
TGCTCGATCC ATGATCCCGT TGCCGCCAGG GACTATGCCG CTCGGCTCAC GGAACAGCGG
CAGCGCTTCG CCGGCGATCT TGAGATCGTC ATGCGCGTCT ATTTCGAAAA GCCCCGCACC
ACCGTCGGCT GGAAGGGTCT GATGAACGAC CCGCATCTCG ACGGCAGCTA CCGCATCGAG
GAGGGGCTGA GGATTGCCAG ACGCCTGCTG CTCGATATCA ATGCGATGGG TCTTCCGGCC
GGCGTCGAAT TCCTAGACAC GATCACGCCG CAATACATTG CCGATCTCGT CAGTTGGGGA
GCGATCGGCG CACGCACCAC CGAAAGCCAG GTCCATCGTC AGCTTGCCTC CGGCCTTTCC
TGCCCGATCG GCTTCAAGAA CGGCACCGAC GGCGGCGTGC GTGTGGCGCT GGACGCCATC
CTCGCCGCCT CGCAGCCGCA TCACTTCCCC GCCGTGACCA AGGACGGACA GGCGGCCATC
GCCTCGACGA CGGGTAATGA GGACTGCCAC ATCATCCTAC GCGGCGGCAA GCGGCCGAAC
TATGAAGCGG CCGACGTCGA AGCGGTCACC GGCGAAGCCC TCAAGCTCGG CGTCGCCCGG
CGCATCCTCA TCGATGCCAG CCACGCCAAC AGCGGCAAGG ATCCGATGAA CCAGCCGCTC
GTCGTCAAAT CGGTGGCCGC ACAGATTGCC GCCGGGAACA ACGACATCAA GGGCATGATG
ATCGAAAGCA ACCTCGTCGC CGGCCGCCAG GATCTCGTTC CCGGCAAGCC GCTGGTCTAT
GGCCAGTCTA TCACCGACGG CTGCATCGAC TGGGCGATGT CGGTCGCGGT GCTGGAAGAC
CTGGCAAAAT CCGCCCGCGA GCGCCGCCAG ACCCGCGCTT AA
 
Protein sequence
MSDTIDDLRI VEITPLTKPA DIIAEISRNA DVSKTVTINR EAIRKILQGE DDRLIVVIGP 
CSIHDPVAAR DYAARLTEQR QRFAGDLEIV MRVYFEKPRT TVGWKGLMND PHLDGSYRIE
EGLRIARRLL LDINAMGLPA GVEFLDTITP QYIADLVSWG AIGARTTESQ VHRQLASGLS
CPIGFKNGTD GGVRVALDAI LAASQPHHFP AVTKDGQAAI ASTTGNEDCH IILRGGKRPN
YEAADVEAVT GEALKLGVAR RILIDASHAN SGKDPMNQPL VVKSVAAQIA AGNNDIKGMM
IESNLVAGRQ DLVPGKPLVY GQSITDGCID WAMSVAVLED LAKSARERRQ TRA