Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2055 |
Symbol | |
ID | 8013084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2048318 |
End bp | 2048929 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824641 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_002975872 |
Protein GI | 241204776 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTCGT TCCAGCCAGC TCAGACGCAA CGACCTGCGC CGCGCCCTGA ACAGGGCGTA TTCCAGCGCG TGCCCATCAA TATGCAGGGC CGGCTGATGC TTGCGAACTA CGAAGAATTC GAATGCATGG TGATCGACAT GTCGCCTGGC GATATGTACG TCACCTGCCT CGGCCGGCCG CGCGCCAACG AACGCGTCGT CGCTTATATT GACCATCTCG GCCGCGTCGA AGGCTATGTC CAGACGATCG ATGGCCGCGG CTTCACCATG TCGATCAATG CCACCGACCG GAAGCGCGAG AAACTCGCGG CCCAGCTCAC CTGGCTTGCC AACAAACACG AACTCGGCCT GCCCGAGGAT CGCCGCCACG ACCGTCTGAC GCCACGCGAC ACGAAGACCG ATCTGACGCT GGAGGACGGC ACGCTTTATT CCTGCCGCAT CATGGACCTT TCGCTGTCGG GCGCCGCCGT CGACGTCGAA ATGCGCCCTT CGATCGGAAC GGCTGTGCGC CTCGGCAACA TGCGTGGGCG CGTCGTGCGC CACTTCGTCG AAGGCGTGGC AATCGAATTC CTGTCGATCC AGTCCCGCGA GACGCTGCGC GAATTCCTTT AA
|
Protein sequence | MHSFQPAQTQ RPAPRPEQGV FQRVPINMQG RLMLANYEEF ECMVIDMSPG DMYVTCLGRP RANERVVAYI DHLGRVEGYV QTIDGRGFTM SINATDRKRE KLAAQLTWLA NKHELGLPED RRHDRLTPRD TKTDLTLEDG TLYSCRIMDL SLSGAAVDVE MRPSIGTAVR LGNMRGRVVR HFVEGVAIEF LSIQSRETLR EFL
|
| |