Gene Rleg_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1964 
Symbol 
ID8013003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1957419 
End bp1958960 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content60% 
IMG OID644824553 
ProductABC transporter related 
Protein accessionYP_002975785 
Protein GI241204689 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.962291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA GCTCTGACAT CCCGTCACCG GACCCGCTTG CAACCCCGTT CCTTTCGCTT 
TCCGGCGTTG GCAAGACCTA TCCGGGCGTC GTTGCGCTTG AGGGCCTGTC GATCGACATC
ATGCCGGGCG AGGTCATTGG CCTCGTCGGC GAGAACGGGG CTGGAAAATC GACCCTGATG
AAGATTCTTG GCGGCGTGAT CGCACCCGAC CGAGGCACGA TCCTGCTCGA CGGCACAGAG
CTTCGCTTCC TCACTGTGGA ATCGAGTATC GCATCCGGCA TCGCCTTCGT GCACCAAGAA
CTCAATCTCT TTGAAAATCT CGACGTTGCT GCCAATATCT TCCTGGGCCG CGAACCGCTC
AAGGCCGGAC CTTTCAAGCT CGTCGATCGC GATCGGCTGC GAGACATGGT GAAGCCGCTC
TTGAAGCGGG TAGGGGCTCA TTTTTCCGCC GACACACCCG TGGCATCGCT TTCCCTTGCC
GAGCAGCAGA TGGTGGAAAT CGCCAAGGCG CTATCCATCA ACGCCAGGCT CGTCATCTTC
GACGAACCCA CGTCCAGCCT GCCGCTGGCC GAAACCGAGC GGCTCCTGAG CATTATCAAA
TCGTTGAAAG CGGATGGCAT CAGCGTAATT TTCATCTCGC ATCGCCTCCA CGAGGTTGAG
CGCGTCGCAG ACCGGGTCAT AGTCCTGCGC GACGGCACGC TTGTGGGCAC GCTCGCCAAG
AAAGACATCG GCCACGACCA GATGGTCAAG CTGATGATCG GCCGGGTGCT TGCGGCCCGG
ACCGCAAAAC CGCAACGCTC GGCTGGCTCG GTCGCGCTGA AGGCAAGCGG CGTGCGCACC
GAGGCCTATC CCGCCCGCCC CGTTGATCTG GAAATCCGGT ATGGAGAAAT CATGGGGCTT
GCAGGGCTCG TTGGGTCGGG CCGCACCGAG CTTGCAAAAG TACTCTTCGG CATCGACCGG
AGCTACGGCG GAGCCATTCT GCAGGACGGG CGGCAAATTG CGATCAGGTC TGCCCGGGAC
GCCGTCGCTC GTGGCATTTT CCTGGTACCG GAGGATCGCA AGCGCAACGG CATACTTCTT
GATTTCCCGA TCGCCCAGAA CATAACCCTT GCCGATCTCC CCAAGCTCTC CAACCGCTTC
ATGCTTTCTG CCGAGCGGGA GAGGGGAGCG GCCGAAAAGC AGCGTGTTCG CCTCGGTATC
AAGGCGCCGT CGGTTTCGAC GCGAACCGGC ACTCTGTCCG GCGGCAACCA GCAGAAGGTG
GTGCTTGCCA AATGGTTGTC GATGAGCCCG AAGGTGATGA TCTTCGACGA GCCGACGCGC
GGCATCGATA TCGGCGCGAA GAACGAGATC TACGGCCTGA TGCGAGCGCT TGCCGATGCC
GGAGTCGCCA TCCTGATGAT CTCCAGCGAC ATGGAAGAGG TGATCGGCGT TTCCGACCGC
ATCGCCGTCA TGCACGAGGG CCAGATCGCC GGCATATTGG AAGAGGACGA AATCAGCCAG
GAAAGTGTCC TTTTGCTTGC TGTCGGCAAA AGGGTAAAAT AG
 
Protein sequence
MNHSSDIPSP DPLATPFLSL SGVGKTYPGV VALEGLSIDI MPGEVIGLVG ENGAGKSTLM 
KILGGVIAPD RGTILLDGTE LRFLTVESSI ASGIAFVHQE LNLFENLDVA ANIFLGREPL
KAGPFKLVDR DRLRDMVKPL LKRVGAHFSA DTPVASLSLA EQQMVEIAKA LSINARLVIF
DEPTSSLPLA ETERLLSIIK SLKADGISVI FISHRLHEVE RVADRVIVLR DGTLVGTLAK
KDIGHDQMVK LMIGRVLAAR TAKPQRSAGS VALKASGVRT EAYPARPVDL EIRYGEIMGL
AGLVGSGRTE LAKVLFGIDR SYGGAILQDG RQIAIRSARD AVARGIFLVP EDRKRNGILL
DFPIAQNITL ADLPKLSNRF MLSAERERGA AEKQRVRLGI KAPSVSTRTG TLSGGNQQKV
VLAKWLSMSP KVMIFDEPTR GIDIGAKNEI YGLMRALADA GVAILMISSD MEEVIGVSDR
IAVMHEGQIA GILEEDEISQ ESVLLLAVGK RVK