Gene Rleg_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1881 
Symbol 
ID8012933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1866356 
End bp1867201 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID644824470 
ProductABC transporter related 
Protein accessionYP_002975702 
Protein GI241204606 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.176759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.192809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATC GTGATCTGCA GCCCGTTCTT TCCGTCGAAG GATTGACCGT CCGTTTCGGC 
CGAGGCGCCG TACCCGCCGT CTCCAATGTC AGTTTCGACG TCGGGCGCGA ACGCGTCGGG
ATTGTCGGCG AATCCGGTTC CGGCAAATCG ACGACAGGTC GCGCGATCAT GCGCCTTTTG
CCGCCGGCCG CGGTGGTCTC GGCCGAACGC ATGGATCTTA GCGGCGATCC GTTGCTTTCA
AAGAGTGAGC GTCAGATGGG CGCGCTGCGC GGCAAGGACA TCGCGCTGAT CATGCAGGAT
CCGCGCTATT CGCTGAATCC GGTGCTTTCG ATCGGTAAGC AGATCGCCGA AGCCGCCCGC
CTTCACCTCG GTCTTCATAA GAAACAGGCG CATGAGGCTG CCCGCGCCAT GCTGGAGCGC
GTGCGCATCA GCGATCCGGA GCGGGTCATG GCGCTTTATC CGCACCAGAT ATCGGGCGGC
ATGGGCCAGC GCGTGATGAT CGCCATGATG CTGCTGGCGC GGCCGAAGCT TGTCATCGCC
GACGAGCCGA CCTCGGCGCT TGATGTCAGC GTCCGCAAGG ACGTGCTGCT GCTGCTTGAT
GAACTGGTGC GCGAGAATAA TTCCGGACTG CTGTTGATCA GCCACGACAT TCGCATGGTG
GCAGCTTTTT GCGAGCGCAT CATCGTCATG TATGCCGGCC GGATCGTGGA AACGCTGACC
TGTCTCGAGG AGGCGCGCCA TCCCTATACC CGCGGGCTGA TCGCTGCGCT GCCCGACCCC
AGGAATCCGG TTCGCCGGCT TGCAGTTCTC GACAGGACGA AACTCGATCT GGAGACGGCG
CAATGA
 
Protein sequence
MQDRDLQPVL SVEGLTVRFG RGAVPAVSNV SFDVGRERVG IVGESGSGKS TTGRAIMRLL 
PPAAVVSAER MDLSGDPLLS KSERQMGALR GKDIALIMQD PRYSLNPVLS IGKQIAEAAR
LHLGLHKKQA HEAARAMLER VRISDPERVM ALYPHQISGG MGQRVMIAMM LLARPKLVIA
DEPTSALDVS VRKDVLLLLD ELVRENNSGL LLISHDIRMV AAFCERIIVM YAGRIVETLT
CLEEARHPYT RGLIAALPDP RNPVRRLAVL DRTKLDLETA Q