| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1807 |
|---|
| Symbol | |
|---|
| ID | 8012865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1798967 |
|---|
| End bp | 1799419 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644824398 |
|---|
| Product | cyclase/dehydrase |
|---|
| Protein accession | YP_002975631 |
|---|
| Protein GI | 241204535 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.529601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000967244 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAT TCGAAACGCA CCGTCCCGTC CCGCACACGC CCGAGCAGAT GTTCGATCTC
GTCGCCGATG TCGAGCGCTA TCCGGAATTC CTGCCGCTCT GCGAAGCGCT CGCCATCAGG
AGCCGCAAGG AGCGCGACGG CAAGATCCTG CTCGTCGCCG ACATGACGGT CGGCTACAAG
GCGATCCGCG AGACCTTCAC GACACAGGTG CTGCTCAACC GGGCCGAACA CGTCATCGAG
GTCAAATATA TCGATGGCCC GTTCAAATAT CTCGACAATC GCTGGCACTT TGCCGAGACG
CCATATGGCG GCTGCACCGT CGATTTCTTC ATCGATTACG AGTTCAAGAG CCGCATCCTG
GGCGCGCTGA TGGGCTCGAT GTTCGACCGC GCCTTCCGCA TGTTCACCGA AGCCTTCGAG
ACGCGCGCAA ACAGGATCTA CACGCCGGTT TGA
|
|---|
| Protein sequence | MPQFETHRPV PHTPEQMFDL VADVERYPEF LPLCEALAIR SRKERDGKIL LVADMTVGYK
AIRETFTTQV LLNRAEHVIE VKYIDGPFKY LDNRWHFAET PYGGCTVDFF IDYEFKSRIL
GALMGSMFDR AFRMFTEAFE TRANRIYTPV
|
|---|
| |