Gene Rleg_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1643 
Symbol 
ID8015585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1634821 
End bp1635774 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID644824228 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002975469 
Protein GI241204373 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.369842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTT TGGTAATCGG AGCAACGGGC CATGTCGGAA CCTATCTCGT TCCCCGTCTG 
GTGGAAGCCG GTCACGACGT CGTCACGATC AGCCGCGGCA CGGCAAAGCC CTATACGGCA
AACCACGCCT GGGCTGCCGT CGATCAGCGT CAGATGGATC GGGCAGCGAT GGAGCAGACG
GGTGATTTCG GCCCGGCCGT GCGTGGTGTG AAAGCCGACA TCGTCATCGA CATGATCTGC
TTCTCGCTGG AAAGTGCCGA GCATCTGGTG ACGGCGCTGT CGGGGCATGT CGGTCACTTC
CTGCATACCG GCACGATCTG GACGCATGGC CATTCGACGG TCGTACCCAC GCTGGAGGAG
ACGCCGAAAT TTCCCTTCGG CGACTATGGG ACGCAGAAGG CGGCAATCGA AACCTATCTG
CTGCAGCAGG CAAGGCTTCG CGGATTTCCG GCAACCATCA TCCATCCCGG GCACATTGTC
GGTCCCGGCT GGACGCCGCT CAATCCGGCC GGCAATTTCA ACCTGCAGGT CTTTTCAACC
CTTGCCCGCG GAGAGACCCT GGCGTTGCCC CATTTCGGCT TGGAGACCGT TCATCACGTC
CATGCCGATG ACGTGGCGGC GATGTTCATG GATGCGATCG CCAACTGGAA TGCGTCGACC
GGCGAAAGTT TCCACGCGGT TTCGGAGCAG GCATTGACCC TTCGCGGTTA TGCCGAATCC
ATGTCTCGCT GGTTCGGGCA CGAGCCGAAG CTCAGCTTCG CCCCATTCGA CGCCTGGGCC
GAAAGTCAGA CGGCTGAGGA TGCGAAGGCG ACCTGGGAAC ATATTGCCCG CAGCCCGAAT
TGTTCGATCG CAAAAGCCGG ACGCCTGCTC GGTTACACTC CGAGATACAC CTCCCTGCAG
GCGGTGCAGG AATCCGTGGG TTGGCTGGTC GGGCAGGGGC GGATCGAGAC CTGA
 
Protein sequence
MRVLVIGATG HVGTYLVPRL VEAGHDVVTI SRGTAKPYTA NHAWAAVDQR QMDRAAMEQT 
GDFGPAVRGV KADIVIDMIC FSLESAEHLV TALSGHVGHF LHTGTIWTHG HSTVVPTLEE
TPKFPFGDYG TQKAAIETYL LQQARLRGFP ATIIHPGHIV GPGWTPLNPA GNFNLQVFST
LARGETLALP HFGLETVHHV HADDVAAMFM DAIANWNAST GESFHAVSEQ ALTLRGYAES
MSRWFGHEPK LSFAPFDAWA ESQTAEDAKA TWEHIARSPN CSIAKAGRLL GYTPRYTSLQ
AVQESVGWLV GQGRIET