Gene Rleg_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1472 
Symbol 
ID8012558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1456226 
End bp1457077 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID644824061 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002975303 
Protein GI241204207 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT GGTTCATCAC TGGTGCATCC CGCGGCTTCG GCGCGCTGAT GACCAAGGAA 
GCCCTTGCGT CAGGCGATGC CGTTATCGCC ACTGCCCGCA ACCCGAAGAC CATCACCGAG
CAGTTCGGCG AGCATCCGAA CCTGCTGGCC GTTGCCCTCG ACGTCACCAA CGAGGCGCAG
GCCAAGGAGG CAGCGGCTGC CGGCATCGCC CGCTTCGGCC GTATCGACGT CCTCGCCAAC
AATGCCGGCT ACGGCCTGCT CGGCGCTGTC GAGGAAGCCA CCGCCGAAGA GGTCGAAAAG
CTCTATGCCA CAAATGTCTT CGGCCTCTTG AAAGTGACGC GCGCCGTGCT GCCCTATATG
CGCCGCCAGC GTTCCGGCCA TGTCCTTAAC TTCTCATCGA TCGGCGGTTA CTTCGGCTAT
CCCGGCTGGG GCGTCTACGG CTCGACGAAG TTCGCCGTCG AAGGCCTCTC CGAATCGATG
GCCGCCGAAC TCGAACCTTT CGGCATCAAG GTGACGATCG TCGAGCCCGG CTTCTTCCGC
ACCGACTTCC TCGCCGACAC GTCGCTGGCG ATCAGCCCGG CCTCCATCGC CGATTACGAA
GGCACGCCGG CCGGCAACAT GCGCAGTTTC GCCGCCGACG CCAACCATGC CCAGCCCGGC
AATCCCGCCA GGCTCGCCAC CGGCATCATG ACGATGGTCA ACTCGGCCGA TCCGCCGCTA
AGGATGCCGT TCGGCAGCGA CACGGTGGCC GTCATCGAGC AGCAGCATGC CAGCGTCGAA
AAGGAACTTG CCGCCTGGCG CGAACTCGCG CTGTCCACGG ATTTTCCAAG CGATGCAACG
GCCTTGGCCT GA
 
Protein sequence
MKVWFITGAS RGFGALMTKE ALASGDAVIA TARNPKTITE QFGEHPNLLA VALDVTNEAQ 
AKEAAAAGIA RFGRIDVLAN NAGYGLLGAV EEATAEEVEK LYATNVFGLL KVTRAVLPYM
RRQRSGHVLN FSSIGGYFGY PGWGVYGSTK FAVEGLSESM AAELEPFGIK VTIVEPGFFR
TDFLADTSLA ISPASIADYE GTPAGNMRSF AADANHAQPG NPARLATGIM TMVNSADPPL
RMPFGSDTVA VIEQQHASVE KELAAWRELA LSTDFPSDAT ALA