Gene Rleg_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1397 
Symbol 
ID8012489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1393026 
End bp1394504 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content60% 
IMG OID644823982 
ProductABC transporter related 
Protein accessionYP_002975228 
Protein GI241204132 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0472986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.487426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTTT TGCTGGATGT GGAAGGGCTG AAGAAGTCCT TTGGTGGTGT CGCGGCATTG 
CGCGACGGCC GCTTCGAACT TCGCGCCGGC TCGGTCCACG CACTTTGCGG CGGCAACGGC
GCAGGCAAGT CGACCTTTCT CAAGATCCTC ATGGGTATCC ATAATCGCGA TGCTGGCTCG
ATCCGCCGTC GTGGCAAGGA CGTAGACTTT GCCAGCCCCG CCGACGCGCT CGCCTCCGGC
ATTGCCATCA TCGAGCAGGA GTTGAGCCCG GTTCCGCACA TGACGGTAGC GGAAAACATC
TATCTCGGCC GCGAGCCCTC GACACGTTTC GGCGGTATCG ATTTCCGGAC GATGAACCGC
TCCGCCCAAG GGCTTCTCGA CGATCTCGAA TTCGATATCC GCGCCACCCA GTACATGATG
AACCTCTCCG TTGCGCAGAT GCAGCTCGTC GAGATCGCCA AGGCGCTAAG CCACGATGCC
GAGGTCATCT TCATGGACGA GCCAACCTCG GCAATCGGTG AGAAAGAGGC TCAGCAGCTC
TTCGCGGCCA TCCGGCGCCT GAAGGGGCAG GGACGCGGCA TCGTCTATGT CTCGCACCGG
CTTTCGGAAA TCTTCCAGAT CGCCGATTCC TATACCGTGT TTCGCGACGG TGCCTATGTC
GGCAGCGGAG ACCTCAAGCA GATCAGCCGT CCTGATCTCA TCCGGATGAT CGTTGGCCGG
GAACTGGCCG AGGAATATGT CAAGACCAAT ACGCCGACAT CCGAAACCGG CCTCGAGGTT
ACGGCGCTGA GTTGCCCGAA CAAGATCGAG GACATTTCCT TCTCCGCCCG CAAGGGCGAG
ATCTTCGGCA TCTACGGGCT GATGGGCTCG GGCCGAACCG AGATCTTCAA TTGCCTTTTT
GGCCTCGAAA AATCCTCCGA CGGCAGGATC GTCGTCGATG GTGCCCGCAT CTCCGTGTCG
AAGCCGGCGG ATGCGATGGC AAATGGCCTG GCGCTGGTGA CGGAGGATCG CAAGCTGACG
GGCCTCAATC TCTCCGACTC CGTTCGCGCC AACATCTGTA TGGCAAGCTT ACCGGAGATG
AGCCCTTCCT TTGCCATGAG CCGCCGTCGC GAGGCCGAGG CCAGTCGTCG GATCCAGGCG
CAATTTCAGA TCAAGGCCGC CCGTGACACC ATGCCGGTCT CGGGCCTGTC AGGCGGCAAT
CAGCAGAAAG TGGTGCTCGG AAAATGGTTC CTGCGCAATC CGAAGGTGCT GCTCCTCGAT
GAGCCGACAC GTGGCGTCGA TGTCGGCGCC AAGCGCGAAA TCTACCGCAT CATCTGTGAT
TTTGCCGCGG CCGGCGGAAC GGTCGTGATG ATCTCATCGG AAATCGACGA AGTTCTGGGC
ATGTCGGACC GTATCATGGT GATGCGCGCC GGTAGGAGCG CGGGAATTTA CAGCCGGGAG
GAAACGGATG CCCAATCACT CGTCCACCTA TCGACCTGA
 
Protein sequence
MELLLDVEGL KKSFGGVAAL RDGRFELRAG SVHALCGGNG AGKSTFLKIL MGIHNRDAGS 
IRRRGKDVDF ASPADALASG IAIIEQELSP VPHMTVAENI YLGREPSTRF GGIDFRTMNR
SAQGLLDDLE FDIRATQYMM NLSVAQMQLV EIAKALSHDA EVIFMDEPTS AIGEKEAQQL
FAAIRRLKGQ GRGIVYVSHR LSEIFQIADS YTVFRDGAYV GSGDLKQISR PDLIRMIVGR
ELAEEYVKTN TPTSETGLEV TALSCPNKIE DISFSARKGE IFGIYGLMGS GRTEIFNCLF
GLEKSSDGRI VVDGARISVS KPADAMANGL ALVTEDRKLT GLNLSDSVRA NICMASLPEM
SPSFAMSRRR EAEASRRIQA QFQIKAARDT MPVSGLSGGN QQKVVLGKWF LRNPKVLLLD
EPTRGVDVGA KREIYRIICD FAAAGGTVVM ISSEIDEVLG MSDRIMVMRA GRSAGIYSRE
ETDAQSLVHL ST