Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1297 |
Symbol | |
ID | 8015546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1279414 |
End bp | 1280082 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644823878 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_002975128 |
Protein GI | 241204032 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.525568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGCTC TCCATGACAT CCTCAACAGA TCCTATGACG CCTTCCTTTT CGACATGGAC GGAACGCTGC TGAATTCTAT TGCCGTCGTC GAACGCGTCT GGAGTGAATG GGCAAGACGC CATGGCTTCG AGCCGGCGGT CTTCTTGAAG ACGATCCATG GCATCCGCGC CTCCGATGTG ATCCGCGGAC TCGGCCTGCC CGGCGTCGAT CCGGCCCATG AGGCGGATCT GCTGCTCGCC GAGGAAATGG AGGATGTCTC CGGCATCGTC GAAATCCCCG GCGCCGTCCG CTTCCTCTCC GCCATCGCCG AGGGCCGATG GGCAATCGTC ACTTCGGCGC CGATCGAGCT CGCCAGGCGC CGCATGGAAG CCGCCGGCAT TCCGATGCCG AAGGTCATCG TCAGCGGTCA AGAGGTCAAA TCAGGCAAGC CCAGCCCCGA AGGATATCTG CTCGGCGCAA GCCGCCTCGG CGTCGATCCG AAAAAATGCC TGGTCTTCGA AGATGCCGTC GCCGGCATTC TCGCCGGCGA AGCCGCCGGC GCCGACGTTA CCGTCATCAC CGAAACGCAC GCCACGCCCT TCGAAACGCC GCATTTTTCG ATCGCCAACT ACCAGGCGTG GCAGCCCATC CAAACCGCCG AAGGTCGGCT GAAGCTCGCC GCGATCTGA
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Protein sequence | MPALHDILNR SYDAFLFDMD GTLLNSIAVV ERVWSEWARR HGFEPAVFLK TIHGIRASDV IRGLGLPGVD PAHEADLLLA EEMEDVSGIV EIPGAVRFLS AIAEGRWAIV TSAPIELARR RMEAAGIPMP KVIVSGQEVK SGKPSPEGYL LGASRLGVDP KKCLVFEDAV AGILAGEAAG ADVTVITETH ATPFETPHFS IANYQAWQPI QTAEGRLKLA AI
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