Gene Rleg_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1100 
Symbol 
ID8015522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1082740 
End bp1084116 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content66% 
IMG OID644823683 
ProductGlutamate--putrescine ligase 
Protein accessionYP_002974934 
Protein GI241203838 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.2027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGGA GGATTTTCAA GGTCATGGCA AGCGACAGGA TGGACGGCAA GGCCGACGGC 
GGCGATCCGC GCTTCGAGAT CCTGATCGTC GGCATGAACG GCGACCTGCG CGGCAAACAG
CTTCCACCCG GCGCCGAAGC CAAGGTCTGG GCCGGGGACA TCCGCCTGCC GACCTCGACG
CAATCGCTCG ACATCTGGGG TGACGACAAT GACGATATCA CCGGCCTGTC ACTGACGATC
GGCGATCCTG ACGGCAAGGT CGTCCCCGAC CGGCGCAGCT TGGCGCCGAT GCCTTGGGCG
CCCGAGGGCT CGATGCAGGT GCTCGCCACC ATGCACGAAT TCGAAGGGAG CCCGAGCTTC
ATGGATCCGC GCGCCATCCT CGCTTCGGTG CTGGAGCGCT ATGCGGCGCG CGGGCTGACG
CCCGTCGTCG CCACCGAGCT GGAATTTTAC GTGATGTCGG GAGACTGGCG CGAAACCGGA
CGCCCCTGCC CGCCCGAAAG CCTCACCTTT CGCGGCGAAC CGAACGGTTT TCAGCTCTAC
GACATGAGCG TCGTCGACGC GCTCGACGGC TATTTGCAGA CGCTGAGGGC CTATGCGAGA
GCGCAGGACC TGCCGGCGGA TGCGACGACA GCGGAATTCG GTCCGGGCCA GTTCGAGGTC
AACCTGCTGC ACCGCGCGGA CGCGCTGGCA GCCGCCGACG ATTGCCTCTA TCTCAAGCGC
ATCGCCGAAC AGGCGGCGCG CCGGCACGGG CTGAAATCGA CCTGCATGGC CAAACCCTAT
TCCGAACATG CCGGCTCCGG CCTGCATGTG CATGCGAGTA TCATCGACGG ACAAGGCCGC
AACATCCTCG ATGCCAAGGG CGGCGAGCCG AAGATGCTCA AATCGGCGAT AGCAGGCCTG
CTCGACTCCA TGCGCGCGGC GCAGCTGATC TTCGCCCCCT TCGCCAATTC CTACCGCCGC
TTCCAGCCGG GCTCGTTTGC GCCTGTCGAT CTGACCTGGG GAAGCGGCCA TCGCGGCACG
GCGATCCGCA TCCCCGACAA GGATGGGCCG GCCGCACGCA TCGAGCACCG CGTCGCCGGC
GCCGACGCCA ATCCCTATCT GCTGCTGGCA GCGATCCTCG GCGGCATGCT CACCGGTCTC
GACGGCGACC TCGACCCCGG TGAGGAGACG ACGCCATCGC ACACACCTGC GAATACGGCG
CGACTGACGC ATGATTTCCT CAGCGCCGTC GAGACCTTCC GCACCTCGCC GTTCATCGCC
GATATCTTCG GCGCGCGCTA TCAGGCGCTC TATGGCGACA CCAAGCGCAA GGAAGCGCTT
GCGCATCTGC GCACCGTTTC GGATTTCGAC TACCGCACCT ATCTGCCGCG GCTCTGA
 
Protein sequence
MSRRIFKVMA SDRMDGKADG GDPRFEILIV GMNGDLRGKQ LPPGAEAKVW AGDIRLPTST 
QSLDIWGDDN DDITGLSLTI GDPDGKVVPD RRSLAPMPWA PEGSMQVLAT MHEFEGSPSF
MDPRAILASV LERYAARGLT PVVATELEFY VMSGDWRETG RPCPPESLTF RGEPNGFQLY
DMSVVDALDG YLQTLRAYAR AQDLPADATT AEFGPGQFEV NLLHRADALA AADDCLYLKR
IAEQAARRHG LKSTCMAKPY SEHAGSGLHV HASIIDGQGR NILDAKGGEP KMLKSAIAGL
LDSMRAAQLI FAPFANSYRR FQPGSFAPVD LTWGSGHRGT AIRIPDKDGP AARIEHRVAG
ADANPYLLLA AILGGMLTGL DGDLDPGEET TPSHTPANTA RLTHDFLSAV ETFRTSPFIA
DIFGARYQAL YGDTKRKEAL AHLRTVSDFD YRTYLPRL