Gene Rleg_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1027 
Symbol 
ID8015514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1008528 
End bp1009190 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID644823610 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_002974861 
Protein GI241203765 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.494207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGACG GCGACCAGCT GAAAATGGAC TGCGTAATGT CTGATCAAGC CGGAAATAGA 
CGGCCGCCGC GCGGTGTGGC CACCGCGCGG CTCCGGGAGA TGCTGGAACT CGCCCGGGCG
AAGGGCGGCC TCTCCATCGG TGAGGCTTTG GAGGCGATGG GCTCGACCAG CATCGCCTTC
ACCATCCTGT TCCTGGCAAT CCCGGCACTG ACCCCGATTC CCGGGCCATT CGGAATGGTT
TTCGGTACCG CGCTGGCGCT GGTCTCCCTC CAGATCGTTG CGGGCGGCCG GAAGGTCTGG
CTGCCCGCCA TCGTCAGGGA TCGCCGGGTT TCATCGGCGG CGCTCGATCT CGTCGTGGGT
CACGCGGTCC CGGTGATCGC CCGGGTGGAG AAGGTCGTGC GCGCCGGCCG GCTGCAGGCC
CTCACCGGCC CGACGGTGCA GGCGCTGCTC GGCATTCCTG TCTTCCTGCT CGCCGTGGTG
ATCGCGCTGC CGATCCCCTT CGGCAATATT CTGCCGGTGT TCTCGCTGGT GGTGCTCGCC
GTCGCCCTGA TGGAGCGGGA TGGTCTCGTC ACCCTGATCG GACTGCTGCT CACATTGGCG
ACCATCGTCG CGACTGCCGC CTTGCTTTAT TTTATCAAGG CGATGATCTT CACGGCCTCT
TAA
 
Protein sequence
MRDGDQLKMD CVMSDQAGNR RPPRGVATAR LREMLELARA KGGLSIGEAL EAMGSTSIAF 
TILFLAIPAL TPIPGPFGMV FGTALALVSL QIVAGGRKVW LPAIVRDRRV SSAALDLVVG
HAVPVIARVE KVVRAGRLQA LTGPTVQALL GIPVFLLAVV IALPIPFGNI LPVFSLVVLA
VALMERDGLV TLIGLLLTLA TIVATAALLY FIKAMIFTAS