Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0635 |
Symbol | |
ID | 8015463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 671287 |
End bp | 672324 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644823225 |
Product | polysaccharide deacetylase |
Protein accession | YP_002974478 |
Protein GI | 241203382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.297931 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGGAC AATTCAAGCG ATTGGGCAAG CGACTGGCGA TCGGCGCCGG GCTCGAGTTT TCCTGGCTGC TGGCCTCGGC CGGGCTGATG CGCGAAGCAC GCGGGCGCGG CGTGGTCTTC ACGCTGCATC ATGTCCGCCC GCACGTGGCC GAAGCCTTCG AGCCGAATGC GCATCTTGAA ATCACCCCGC GGTTTCTCGA CGTGGCGCTG CGGCGGCTGA GGCGAGAGGG CTATCGCTTC GTGCCGCTCG CCGAGGTGCC GGCGCTGCTG GCGGAGCCGG AAGGCGCAAA GCCTTTCGCG GCCTTCACGC TTGACGACGG GTACAACAAC AATCTGGAAC ATGCGCTGCC GGTGTTCGAG CGGCATCAGG CGCCGTTCAC GGTATTCGTC GCCAAGGGTT TTGCCGAAGG CTCTCACAGC ATCTGGTGGG AAACGCTGGC GATCCTCCTG CGCCGGGCGG CCGAAATCCG TTTCGATTTC GGCCGCGGCA TGGAGCGCCT TGTGCTCGAT AGCCCGCAAC AGCAATGGCA CGCCTTCGAT CGCTTTGCCG CCTACGTCCA CCGCTCCGAC GAGGCGCGCG CCGTTGCCGC CATCGATCTG CTGGCGCGCG AAAACGGCAT CGAGCCGACG GATATCGTCC GCGAACTGGT AATGGGCCCT GGCCAATTGC AATGGCTGGC GGCACATCCG CTCGCAACGC TCGGCGCCCA TACGATCAGC CATCGGGCGC TCGCCCGGCT GCCGGAAGCC GAAGCGCGAA TCGAAATGCA AGCTTCGGCG GATTACCTCG AGGCGGTGAC CGGTATTCGT CCCGAGACGA TCGCCTATCC TTACGGCACG CCTGCGGCTG CGACCGCCCG CGAGGCGCGC ATCGCTCGCA ATCTCGGCTT TACCCTTGCG GTCACCACGC AGCCCGGGTT GCCGGCAGCG AAGCTGACCG GCTATCTCCC GCGCATTTCG CTCAACGGAT TCTACCAGAA GCGACGTTAC GTCTCGGCTC TCGCCTCCGG CATACCGCTG AAGATGATGG GCCGATAA
|
Protein sequence | MTGQFKRLGK RLAIGAGLEF SWLLASAGLM REARGRGVVF TLHHVRPHVA EAFEPNAHLE ITPRFLDVAL RRLRREGYRF VPLAEVPALL AEPEGAKPFA AFTLDDGYNN NLEHALPVFE RHQAPFTVFV AKGFAEGSHS IWWETLAILL RRAAEIRFDF GRGMERLVLD SPQQQWHAFD RFAAYVHRSD EARAVAAIDL LARENGIEPT DIVRELVMGP GQLQWLAAHP LATLGAHTIS HRALARLPEA EARIEMQASA DYLEAVTGIR PETIAYPYGT PAAATAREAR IARNLGFTLA VTTQPGLPAA KLTGYLPRIS LNGFYQKRRY VSALASGIPL KMMGR
|
| |