| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0607 |
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| Symbol | |
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| ID | 8011791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 639563 |
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| End bp | 641479 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644823197 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002974450 |
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| Protein GI | 241203354 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.215846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACAAC TGCCGAAGAC CCCCCTGCTC GACCAGGTCA TCTATCCCGC CGACCTGCGC
AAGCTCGAGG ATCGCGACCT ACCGCAGCTT GCCCGCGAAG TCCGGGACGA AATGATCGAT
GCGGTGTCGC GCACCGGCGG CCATCTGGGC GCCGGTCTCG GCGTCGTCGA ATTGACGATC
GCCATCCACA GCGTCTTCGA CACGCCTGAT GATCGGCTGA TCTTCGATGT CGGCCATCAA
TGTTATCCGC ACAAGATTCT CACCGGCCGG CGTGACCGCA TCCGGACGCT GCGCCAGGAA
GACGGGCTGT CCGGCTTCAC CCGCCGGGCG GAAAGCGAAT ATGATCCCTT CGGCGCGGCG
CATTCCTCGA CCTCGATCTC GGCCGGCCTC GGCATGGCGA TTGCCGCCGA CCTCGACAAA
TCAGACCGCC GCGTCATCGC CGTCATCGGC GACGGGGCGA TGTCGGCCGG CATGGCCTAT
GAGGCGCTGA ACAATGCCGG CGCACTCGAT GCGCGCCTGA TCGTCATCCT CAACGACAAC
GACATGTCGA TCGCACCGCC GACGGGCGCG ATGAGCGCCT ATCTCGCGCG CCTTGCCTCG
GGACGCACCT ATATGGGCTT CCGTGACTTC GGCAAGAAGC TGACGGCCTA TCTCGGCAAG
AATATCGACC GGGCGATCAC CCGCGCCGTC GAGCATGCGC GCGGCTACGT CACCGGCGGC
ACGATGTTCG AGGAGATGGG CTTCTATCAT ATCGGGCCGA TCGACGGGCA TTCCTTCGAC
CACCTGCTGC CCGTGTTGCG CAATGTGCGC GACAATGGGC GCGGGCCGGT GCTGATCCAT
GTCGTCACCC AGAAGGGCAA GGGCTATCCG CCGGCGGAAG CCGCGGCCGA TAAATATCAC
GGCGTCAACA AGTTCGACGT CATCACCGGC GCCCAGGCAA GGGTGAAGCC GAATGCGCCG
AGCTATACCA GCGTCTTTGC CGAAGCGCTG GTGCAGGAAG CCGCCCTCGA CGACAAGATC
GTCGGCATCA CCGCCGCCAT GCCAAACGGC ACCGGCCTCG ACAAGCTCGC CGAGGCCTAT
CCGTCACGCT GTTTCGACGT CGGCATTGCC GAACAGCATG CCGTGACCTT CGCCGCCGGC
CTGGCAGCGG AAGGCTACAA GCCGTTCGCC GCCCTCTATT CCACCTTCCT GCAGCGCGCC
TACGACCAGG TCGTGCACGA CGTGGCGATC CAGGGACTGC CGGTGCGTTT CCCGATCGAC
CGTGCCGGCT TCGTCGGCGC CGACGGGCCG ACCCATGCCG GCTCCTTCGA CACCGCTTTC
CTCACCACCC TGCCCGGCTT CGTGGTGATG GCGGCGGCCG ACGAGGCCGA ACTCAAGCAT
ATGGTGCGCA CGGCTGTCGC CTATGATGCC GGGCCGATCT CGTTCCGCTA TCCCCGCGGC
GAAGGCGTCG GCGTCGACAT GCCGGTGCGC GGCGAAATCC TGCAGATCGG CAAGGGCCGC
ATCGTCAAGG AAGGCACCAA GGTGGCGCTG CTCTCCTTCG GCACACGTCT TGCCGATTGT
CTGCTCGCCG CCGAGGATCT CGATGCCGCC GGGCTGTCGA CGACGGTCGC CGATGCGCGC
TTCGCCAAGC CGCTCGACCA CGACCTGATC CGCCAGCTTG CCCGCCACCA TGAGATCGTG
ATCACCGTCG AGGAAGGCTC GATCGGCGGC TTCGGCAGCC ACGTGATGCA CTTCCTCGCC
ACCGAAGGCC TGCTCGACAA CGGGTTGAAG CTGCGCTCGC TCGTGATGCC CGATATCTGG
ATGGAACAGG CCAAGCCCGA AGCCATGAAC GCCCACGCGG GGCTGGATCG CGCCGGCATC
GTTTCGACGG TGTTCAAGGC GCTGGGGCGT GGGGTTGCGG TTGGGGTTGC TGGATAA
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| Protein sequence | MTQLPKTPLL DQVIYPADLR KLEDRDLPQL AREVRDEMID AVSRTGGHLG AGLGVVELTI
AIHSVFDTPD DRLIFDVGHQ CYPHKILTGR RDRIRTLRQE DGLSGFTRRA ESEYDPFGAA
HSSTSISAGL GMAIAADLDK SDRRVIAVIG DGAMSAGMAY EALNNAGALD ARLIVILNDN
DMSIAPPTGA MSAYLARLAS GRTYMGFRDF GKKLTAYLGK NIDRAITRAV EHARGYVTGG
TMFEEMGFYH IGPIDGHSFD HLLPVLRNVR DNGRGPVLIH VVTQKGKGYP PAEAAADKYH
GVNKFDVITG AQARVKPNAP SYTSVFAEAL VQEAALDDKI VGITAAMPNG TGLDKLAEAY
PSRCFDVGIA EQHAVTFAAG LAAEGYKPFA ALYSTFLQRA YDQVVHDVAI QGLPVRFPID
RAGFVGADGP THAGSFDTAF LTTLPGFVVM AAADEAELKH MVRTAVAYDA GPISFRYPRG
EGVGVDMPVR GEILQIGKGR IVKEGTKVAL LSFGTRLADC LLAAEDLDAA GLSTTVADAR
FAKPLDHDLI RQLARHHEIV ITVEEGSIGG FGSHVMHFLA TEGLLDNGLK LRSLVMPDIW
MEQAKPEAMN AHAGLDRAGI VSTVFKALGR GVAVGVAG
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