Gene Rleg_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0401 
Symbol 
ID8011605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp413858 
End bp415705 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content63% 
IMG OID644822996 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002974251 
Protein GI241203155 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000192098 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCGCC TATTCTCTAC GTCGATCGTA CGCCAGATCG TTGCGATCAC GCTGTTTCTG 
CTGGCGATCA GCACGGCCGC CATCGTTGGC GTGACCTATT ACAATTTGAG CCATCAGGTC
ATGGACGGGG CCGTCTCCGA TGCGAATGAC GCCGCCCGTG CGATGGCTGT CCTCTACGGC
GCGGCTGATC AGGCTGCAAA GATCGAACTG AAGGACAATC AGCTCTTCGC CGTCACCGAA
GACGCCATCC CGGCCCTTGC CGATCATTCG CTGGTCGACC GCACCGCGCA GTCGATCGCT
GGTGTCGCGA CCATCTTCCA AAAGCAGGGC GGCGACTACG TCCGCATATC CACCAACGTC
AAGAAGGAAA ACGGCGACCG CGCCGTCGGC ACCAAGCTGA TAGCCGAGCA CCCGGCCCAG
CCGGTTCTCG CCAGGGGTGA GGCTTATTAC GGTCCGGCGG AGCTTTTCGG CCGCAAGTTC
ATGACCGGTT ATTTCCCCAT GAAGAATGCC TCGAACGCCA ATGTCGGCAT TCTCTTCATC
GGCATTCCGA TGGAGGTCTA TTACCAGCGC ATGTATGAGC TGCAGATGCT GGTTCTCGGT
GTCGGCGCCA TCGTCATGCT CATCGTCGGC GTTCTCGCCT TTTATGCGAT CCGCCTGTCG
GTGAAGCCCT TGCAGGCGCT GACAGCGAGC GTGCACTCGA TTTCCGCGGG CGATCTCGAA
GGGGCGATCC CCTGTGTCGA AAAGAAGAAC GAGTTCGGCG ACATCGGCCG GGCCTTGGCG
CTTTTCAGCG ACAGTGCCCG CGCAAGGCGC GACCTGGAAA CCCAGGCTGC CGAACAGCGC
GAATTGAGCG ATGCCGAACG GGCCAGGAAC GATGCCGACA AGCGCTCGCT CGACGGCCAG
ATCGACTTTG CCGTCAACCA GCTTGCCGCC GGCCTCGGGC GCCTGTCGCA GGGCGATGTC
TCGCAGACGA TCGGTACGCC CTTCGTTGGC CGGCTGGAGC AGCTGCGCGT CGATTTCAAC
GCTTCCCTCT TGCGGCTCCA GGATACGCTG TCCGGTATCC GTGACAGCGC TTCGACGATC
CAGCGCAACA GCGGCGCCGT CTCCGTCTCT GCCGGCGAGC TTTCGAAACG CACCGAGGCG
CAGGCGGCGA ACCTCGAGGA GACTGCGGCC GCGGTGGAAG AGATCACCGT GACCGTTCGT
TCGTCCGCCG AGCGTGCCCG TGAAGCCAAC AATGTCGTGG CTGCGACCAA GAAGACGGCC
GACAGTTCCG GCGCCGTCGT CGGCGATGCC GTTGCTGCCA TGGATCGCAT CGAGCAGGCA
TCACAGCGTA TCGAGCAGAT CATCGAGGTG ATCGACGACA TCGCCTTCCA GACCAATCTT
CTGGCGCTGA ATGCCGGCAT CGAGGCGGCG CGCGCCGGCG AGGCGGGCAA GGGTTTTGCC
GTCGTCGCCC AGGAAGTCCG CGAACTCGCC CAGCGCTCGG CCGATGCGGC ACGCGAGATC
AAGTCGCTCA TCGAGACGTC GAGCCGCGAA GTGACGGCAG GCTCCGAACT GGTCCAGAAG
ACCGGCAGCG TCCTTGCCTC GATCAGCCAG GAGATCATCG CGATCAGCGG CCATGTCGAG
ACCATCGCCA CCGCCAGCCG CGATCAGTCG GCCGCGCTGC AGGAAGTCAA CGGTTCGGTC
AACGCCATGG ATCAGATGAC CCAGAAGAAC GCGGCGATGG TTGCCGAGAC GACGCAGGCA
AGCCGCCTGC TTGCCGGCGA AGCCGATACG CTGATGGCGC TGATCGAGCG CTTCCGCATC
GTCGCAGAAT CGGCACCGGC TCATCTCGGA GCAAGAAGAG TCGCCTGA
 
Protein sequence
MLRLFSTSIV RQIVAITLFL LAISTAAIVG VTYYNLSHQV MDGAVSDAND AARAMAVLYG 
AADQAAKIEL KDNQLFAVTE DAIPALADHS LVDRTAQSIA GVATIFQKQG GDYVRISTNV
KKENGDRAVG TKLIAEHPAQ PVLARGEAYY GPAELFGRKF MTGYFPMKNA SNANVGILFI
GIPMEVYYQR MYELQMLVLG VGAIVMLIVG VLAFYAIRLS VKPLQALTAS VHSISAGDLE
GAIPCVEKKN EFGDIGRALA LFSDSARARR DLETQAAEQR ELSDAERARN DADKRSLDGQ
IDFAVNQLAA GLGRLSQGDV SQTIGTPFVG RLEQLRVDFN ASLLRLQDTL SGIRDSASTI
QRNSGAVSVS AGELSKRTEA QAANLEETAA AVEEITVTVR SSAERAREAN NVVAATKKTA
DSSGAVVGDA VAAMDRIEQA SQRIEQIIEV IDDIAFQTNL LALNAGIEAA RAGEAGKGFA
VVAQEVRELA QRSADAAREI KSLIETSSRE VTAGSELVQK TGSVLASISQ EIIAISGHVE
TIATASRDQS AALQEVNGSV NAMDQMTQKN AAMVAETTQA SRLLAGEADT LMALIERFRI
VAESAPAHLG ARRVA