Gene Rleg_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0400 
Symbol 
ID8011604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp411095 
End bp413626 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content63% 
IMG OID644822995 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002974250 
Protein GI241203154 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00170819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGATTG ACAAGATTCT TTCCCGCTTC AGGATCAAGA CCAAGGTTCT GATCTTCGTT 
CTGCCTTTCG TCGTCACCAT TTCGGCGGTG GGCCTGACCG GCCTCTACGC TTCGGGACTA
CTGCAGGGCC GCATGGAAAT ATCCAACAGC GTGCTGCAGT CGCTCAGCGG CTTCAAGGAT
CTCTATGGTT CGATGGATGA TTTCCTGCGC GTCACCAGCC CTGAGGCGCG TGACAAACTG
AGCGCGGATC TGAAGATCCA GCAAGGCGTG CTCGACCAGA CGCTGAGCCA GGTCGGTGAC
GAAGCCGCTG GCCGTGACAG CCTTGCGGAG GCATCGCGCC GCACCAAGGA AATTTCGGGC
GTCGTCGACA AGCTCTGGGC CCTGCACGAG CAGGAACAGG CATTGCATGA GCAGATCGAC
GCGGCCCAGA AAAGCGTGAT CAGCACCCGT TTCACCGTGT CCTACCAGGC CGAGCAGTTG
CAGAGCACCG TCCAGAGCGA CGAGAGCGCC GCCACCAGCA CCCTTCGCAC GGCCGACCGC
CTGCTGAAGG GCGGCGATTT CCTCGGCACC GTCGCCAGCG GCTTCAGCAA GCCGCAGACA
CCGCAGGACA AGATCGCCTT CATCAACGAA CAGATGCCGG AGATCATCAA ATCGCAGCGT
CTGATCGCCA TCTCGGTTCC GAGCAATCAG AAGAATGTCA TCGAGGCACT GGCTGCGACC
ATCGACGGCA TCAAGGCGAT CGTCCAGACG CCCAATCCGA CCGACGAGAC CGCCACCGAA
CTCGGCCGCC TTGTTTCGCG CTTCCGCCAG ACCTCGACCT ATACGCAGCT GACCGCAACG
CAGAAGATGC GTGACGCGAC CCAGGAATTC GCGGCGCTCG ACGGCCGGAT CGCCCAGGCC
AACTCGGTCC TGCAGGATAC GAGGCGCCTC GAAAATTCCG TCTATTCGCT GCAGATCGTT
CTTTCCGACT TTCTCGCCGA CTCCAGCAAG GAAAATCTCG TGCGTCTGCA GCAGCAGGCC
GGCACGCTCG GCAAGGACAT GCAGGTGCTG GTCACCAGCG CCAAGGGCAT GGGCTTTGCC
GAAGGTATAT CCGGCGCGAT CCAGCCGGCG CTCGACGTCA TCTCCGGCGG CGGCTCGAAG
ATCGTCGACA CGATCGGCGA GCGCGTCACG GCCTATGCCG CCGCCCGCCA GGAGCTCGAC
CAGATCTGGA AAAAGCTGAC CGATTTCGCC GAACTGCAGA AGCAGACGGC CGGCACCGAG
CGCACTCAGG CAAACAGCAT TTCCGTCATG ACCACCGGTC TCGGCATCCT GCTGTCGATC
CTCGGCGGTA TTGCCCTGGT GCTGACGCTG CAGCGCCCGA TCAGCCATAT CACCGCCGCC
ATGCGCCGCA TCGCCGAAGG GGCGCTGGAC ACCAGCATCT CCGGCGAGCA GCGCCACGAT
GAAATCGGCG ACATGGCCCG CGCGCTCGGC ATCTTCAAGG AAAATGCCAT CTCGAAGATC
CGCATCGAGG AGCAGAGCGA CGAGGAACGC GCCGCCGCCG AACATGAGCG CCTGCGCAAC
GACGCCGAAA AGCGCGAGAT GGATCGCCAG ATCGAATTCG CGGTCAACGC GCTCGCCGCC
GGCCTCGAAC GCATGTCGCA GGGCGATATC TCAACGACGA TCGAAACGCC TTTCATCGGC
CGCCTCGAAC AGCTGCGCCA GGATTTCAAC GGTTCGATGA TGCGACTGCA GGCGACGATG
AGCCAGATCC GCGACAATGT CGAATTGATC CAGGGCAACG GCAATCAGAT GGCCCAGTCG
GCCGAGGATC TCTCCAAGCG CACTGAACAG CAGGCTGCCT CGCTCGAAGA GACCGCGGCT
GCCGTCGATC AGATCACCGT CACCGTCCGC TCGTCGGCCG AACGCGCCAA GGATGCCGAC
CAGATCGTCC GCCAGGCCAA GCGCAGCGCC GACGATTCCG CCGTCGTCGT CAGCAATGCG
ATCGACGCGA TGAGCCGCAT CGAAGGTGCC TCGCGCCAGA TCGAGCAGAT CATCGGCGTC
ATCGACGAGA TCGCCTTCCA GACCAACCTC CTGGCGCTCA ACGCCGGCAT CGAGGCGGCG
CGCGCCGGTG AGGCCGGTAA AGGCTTCGCG GTGGTCGCGA TGGAAGTCCG CGAACTGGCC
CAGCGCTCCG CAGCCGCGGC GCAGGAGATC AAGGGGTTGA TCAACAAATC GACCAACGAG
GTCAATTCCG GCTCGCAATT CGTGCAGGAG ACTGGCACGG TGCTCGCCAA GATCAGCGCC
CAGATCGTCA CGATCAGCCA GCATGTCGAG ATGATCGCTC GCGCCAGCCA CGACCAGTCC
AACGCGCTGC AGAGCGTCAA CGCGACGGTC AACCAGATGG ACCAGATGAC GCAGCAGAAC
GCCGCCATGG TGGAGGAAAC GACTGCCGCC AGCCGCGAAC TGGCCGACGA GGCCGGTTCG
CTGCGCCGGC TCATTCAGCA GTTCAAGATC GACGGCGAAG CCACCAGTGC GCCGGTCTAT
CGCGCCGCCT GA
 
Protein sequence
MLIDKILSRF RIKTKVLIFV LPFVVTISAV GLTGLYASGL LQGRMEISNS VLQSLSGFKD 
LYGSMDDFLR VTSPEARDKL SADLKIQQGV LDQTLSQVGD EAAGRDSLAE ASRRTKEISG
VVDKLWALHE QEQALHEQID AAQKSVISTR FTVSYQAEQL QSTVQSDESA ATSTLRTADR
LLKGGDFLGT VASGFSKPQT PQDKIAFINE QMPEIIKSQR LIAISVPSNQ KNVIEALAAT
IDGIKAIVQT PNPTDETATE LGRLVSRFRQ TSTYTQLTAT QKMRDATQEF AALDGRIAQA
NSVLQDTRRL ENSVYSLQIV LSDFLADSSK ENLVRLQQQA GTLGKDMQVL VTSAKGMGFA
EGISGAIQPA LDVISGGGSK IVDTIGERVT AYAAARQELD QIWKKLTDFA ELQKQTAGTE
RTQANSISVM TTGLGILLSI LGGIALVLTL QRPISHITAA MRRIAEGALD TSISGEQRHD
EIGDMARALG IFKENAISKI RIEEQSDEER AAAEHERLRN DAEKREMDRQ IEFAVNALAA
GLERMSQGDI STTIETPFIG RLEQLRQDFN GSMMRLQATM SQIRDNVELI QGNGNQMAQS
AEDLSKRTEQ QAASLEETAA AVDQITVTVR SSAERAKDAD QIVRQAKRSA DDSAVVVSNA
IDAMSRIEGA SRQIEQIIGV IDEIAFQTNL LALNAGIEAA RAGEAGKGFA VVAMEVRELA
QRSAAAAQEI KGLINKSTNE VNSGSQFVQE TGTVLAKISA QIVTISQHVE MIARASHDQS
NALQSVNATV NQMDQMTQQN AAMVEETTAA SRELADEAGS LRRLIQQFKI DGEATSAPVY
RAA