Gene Rleg_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0389 
Symbol 
ID8011594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp397518 
End bp398681 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content63% 
IMG OID644822984 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002974239 
Protein GI241203143 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.387993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.342789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA TCGGAAGCTA CTTCAAGATC GGCCCCGCCC GGCTCTTCGT TCACGCAGCC 
GTTCTGTTGA TCGTCATCAT CTGGTTGATC CCGACGCTCG GCATCTTCGT CAGCGCGCTG
CGCGACAAGG ACCAGATCGT CGTCTCCGGC TGGTGGACGG CCTTCGTCGG CTCGACCCAG
ACGGCCGCGG TCCGCCTTGG TACACCCGAC CAGCAAAAGC AGGAGGGTGC CACCTACGTC
ATCTCGGGCA ATGTGCTGGA AGGCCAGACC GGCCGCGCGG TGAAGGCCTT CGGCAACCGC
ATACAGCAGC CGGCCGCCTT CAAGGCCGGT GAGACCGCCG ATCTCGGCGA CGGTGAAACC
CTGCAGATCA ACAGCGACGG CAGCTACCGC TATGTGAAGA ACGCCGCCTT TTCGCCCGAC
CAACGCCCGA AGCGCATCTA TGCATCCGTC TCGGCGCCGC CGGAATTCAC GATGCAGAAC
TACAACACGG TTCTGACCGG CGAGGGCATC GGCCAATCCT TCATCAACTC GCTGACCGTG
ACGATCCCGG CGACGATCAT CCCAATCCTG ATTGCCGCTT TCGCCGCCTA TGCCCTGAGC
TGGATGGAGT TTCCCGGCCG CGGGCTGCTG ATCGCGCTCG TCGTCGGCCT CATCGTCGTG
CCGCTGCAGA TGTCCCTGAT CCCGCTGCTG CGCCTCTATA ACGAGATCGG CAACATGCTC
GGCCAGCCGT CCAAGACCTA TCCCGGCATC TGGCTGGCTC ATACCGCTTT CGGCATGCCG
CTCGCCATCT ATCTCTTGCG GGCCTATATC GCCGGCCTGC CGAAGGAGAT CATCGAATCC
GCCCGCGTCG ACGGCGCGAG CGATTTCGAG ATCTTCGTCC GCATCGTTTT GCCTCTGTCC
TTCCCGGCAC TCGCCTCCTT CGCCATCTTC CAGTTCCTGT GGGTGTGGAA CGACCTGCTC
GTCGCCATGG TCTTCCTCGG CACCGACAAG GACCACATCG TGCTGACCGG CAGCCTGAAC
GCGCTGCTCG GCTCGCGCGG CGGCAATTGG GAGATTTTGA CGGCGTCAGC CTTCGTCACT
ATCATCGTGC CGCTGCTCGT CTTCTTCGGG CTTCAGCGTT ACCTGGTGCG CGGTCTGCTG
GCGGGTTCGG TCAAGGGAGG CTGA
 
Protein sequence
MTAIGSYFKI GPARLFVHAA VLLIVIIWLI PTLGIFVSAL RDKDQIVVSG WWTAFVGSTQ 
TAAVRLGTPD QQKQEGATYV ISGNVLEGQT GRAVKAFGNR IQQPAAFKAG ETADLGDGET
LQINSDGSYR YVKNAAFSPD QRPKRIYASV SAPPEFTMQN YNTVLTGEGI GQSFINSLTV
TIPATIIPIL IAAFAAYALS WMEFPGRGLL IALVVGLIVV PLQMSLIPLL RLYNEIGNML
GQPSKTYPGI WLAHTAFGMP LAIYLLRAYI AGLPKEIIES ARVDGASDFE IFVRIVLPLS
FPALASFAIF QFLWVWNDLL VAMVFLGTDK DHIVLTGSLN ALLGSRGGNW EILTASAFVT
IIVPLLVFFG LQRYLVRGLL AGSVKGG