Gene Rleg_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0344 
Symbol 
ID8011554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp354145 
End bp355095 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content61% 
IMG OID644822939 
Productsurface presentation of antigens (SPOA) protein 
Protein accessionYP_002974194 
Protein GI241203098 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.566243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0312386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATGA GCAATGCTTC GCACGACAAA CCGGCAATGG ATCCTGCCCT TCTCGCCAAG 
CTGACAGGCG GGCTCGGCGA CAGAGGCGGA GTTGCCAAGA TCTGCAGTTC CTTCGGGGAA
ATCTACAGCG AATTCTTTCC CGACGTCATC AAAAGCGAGA CCGGCCTCGA CGTGACGGTC
AACTATCTCG GCTGCGAGAT CGGCTACAAG AACCACCTGA TCGAAGATCT GAGCGCGAAC
GTCACGCTGG TCGATGCGAC GCTGCGCAAC TGGTCGCAGA ACATCACGCT TGCCTGCGGC
AACGGCTTCG TCATCACGCT GATGGAGCAC CTGCTCGGCG CCACCGCCGA TACGATCGAG
GAACCGGCCG ACCGGCTGCT TTCGATCATC GAGCTCGATC TGGCGGTCAT GGTCTTCGAC
AAGATCGCCA AAGTGCTGCG CTCGGCCGTC AACGCGCCGG GCGGCTTCGA ACCGAGCCTT
TCGGCCCCGC ACGCCCTTGA CGCGCGCGCC CGGCCGCCGG AAGATCGTCC GGACGAATTC
GCCGCTGCCA TCAACATGTC GATCACGCTT GCCGGCATCG TTTCGGAATT CGCCTTGATC
GTTCCGCAGA CGGCGCTGCT CAAGACCAAG GTGACGCCGC CGAAGCCGAA ACGCCAGGCC
ACCGGCAAGT CACCGGAATG GACTGAGCAG CTCGGCGACC AGGTCCGCCG CTCGCATGTC
ACGCTCGAGG CGAAGATCAG GCTGCAGGAC CTGACGCTTC GCACGATATC GAAGCTGATG
GTCGGCGACG TCATTCCGTT CCGCGACCAC GGCGACGTGC GGGTCGAGGT CAGCGCCAAC
AGCAAGGAAT TGTATGTGTG CGAGTTCGGG CGTTCAGGCG AAAATTACAT GGTCCGCGTC
AAGGATACGA TGAACTCGGA TGACGAACTC ATCCGTCATT TAATGAATTA A
 
Protein sequence
MTMSNASHDK PAMDPALLAK LTGGLGDRGG VAKICSSFGE IYSEFFPDVI KSETGLDVTV 
NYLGCEIGYK NHLIEDLSAN VTLVDATLRN WSQNITLACG NGFVITLMEH LLGATADTIE
EPADRLLSII ELDLAVMVFD KIAKVLRSAV NAPGGFEPSL SAPHALDARA RPPEDRPDEF
AAAINMSITL AGIVSEFALI VPQTALLKTK VTPPKPKRQA TGKSPEWTEQ LGDQVRRSHV
TLEAKIRLQD LTLRTISKLM VGDVIPFRDH GDVRVEVSAN SKELYVCEFG RSGENYMVRV
KDTMNSDDEL IRHLMN