Gene Rleg_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0151 
Symbol 
ID8011384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp147453 
End bp148361 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID644822742 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002974001 
Protein GI241202905 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA AACTCGCACT TGCCGTTTCG CTCTCCGCCT TCGCGGTGGG TGCGGCCCAT 
GCCGCCGACG TCGTCGTCTC GTCGAAGATC GACACGGAAG GCACGCTGCT CGGCAACGTC
ATCGCGCTCG CTCTCGAAGC CAACGGCATC AAGACGCAGG ACCGCATCGC GCTTGGCGCG
ACACCGGTCG TGCGCAAGGC GATCACCGCA GGCGAAATCG ACATCTATCC CGAATATACC
GGCAACGCCG GCTTCTTCTT CAACAAGGCC GATGACGCCG CCTGGAAGAA CATCGACCAG
GGCTATGAGC TGGCGAAGAA GCTCGATTAC GATGCCAACA AGATCGTCTG GCTGACGCCG
TCGCCTGCCA ACAACACCTG GGCGCTCGCC GTGCGCAGCG ATGTTGCCGG CCCGAACAAG
CTGAAGAGCC TCACCGACTT CGGCAAATGG GTTGCCGGCG GCGGTGCCGC CAAGCTTGCC
GCCTCCGCCG AATTCGTCAA TTCGGCCGGC GCGCTTCCCG CCTTCCAGAC GACCTACGGC
TTCCAGCTGA AGCCCGACCA GATGGTCGTT CTTTCCGGCG GCGACACGGC GGCAACGATC
AAGGCAGCCG CCGACCAGAC GAACGGCGTC AACACCGCCA TGGTCTACGG CACCGACGGC
GCGATCGAAG CGGCTGAACT CACCGTTCTC GAAGACGACA AGAACGTGCA GCAGGTCTAC
GCCCCGACGC CGATCATTCG CGAAGAGGTG TTGAAGGCCA ATCCGAAAAT CGAGGAAGTG
CTCTCGCCGA TCTTCAAGAG CCTGACCGCC GACGAATTGC GCAAGCTCAA CGCCAAGATC
CAGGTCGATG GCGAGCCGGC AAAATCCGTC GCCGAAGCCT ATCTCAAGGA AAAGGGCTTC
CTGAAGTAG
 
Protein sequence
MLKKLALAVS LSAFAVGAAH AADVVVSSKI DTEGTLLGNV IALALEANGI KTQDRIALGA 
TPVVRKAITA GEIDIYPEYT GNAGFFFNKA DDAAWKNIDQ GYELAKKLDY DANKIVWLTP
SPANNTWALA VRSDVAGPNK LKSLTDFGKW VAGGGAAKLA ASAEFVNSAG ALPAFQTTYG
FQLKPDQMVV LSGGDTAATI KAAADQTNGV NTAMVYGTDG AIEAAELTVL EDDKNVQQVY
APTPIIREEV LKANPKIEEV LSPIFKSLTA DELRKLNAKI QVDGEPAKSV AEAYLKEKGF
LK