Gene Rleg2_6579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6579 
Symbol 
ID6983648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011371 
Strand
Start bp254175 
End bp255065 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID643399574 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002284330 
Protein GI209552415 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.291205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCG AGACCGCGCT GGCGGCACCG CGCCGTCACC AATCCATCAG CAGGGGGAGC 
TCGATCGGGC TCCTCCTCGT CGCCCTGCCG GTCTTCCTGC TTGCCTGGCT GATCGTCTTT
CCGATCTTTT CGGCGGTTTT CGGCACGATT TTTGTTCGAG GCCCGGATGG CGCGACGGCC
TTCTCACTCG CCTCCTACCG CTTCTTCTTT ACCGATGGCT ACAGCCTCGG CAATCTGTGG
TTGACGCTCT GGACCACCGC CGTCTGCGGC GTCCTGCTGC TGGCGATCGG CTTTCCGATC
GCGCTTTACC TTCGTTTCTC GCAAGGGCGC CTTGCGGCTT ACGTGCAGGG CCTGGCGATC
TTTCCGATGT TCGTGCCGTC GATCATCCTC GCCTATGCGC TGATCAGGAC CGTCGGGCCG
AACGGCACCG TCGACCTGCT GCTGAATTCC GTCGGCCTGC CCAAGCTGCG CACGCCCTAT
CTGACGCCAT GGGGCCCGGT CATCGGCCTC GTCTGGGATA ATCTTCCGCT GACGGTGCTG
ATGCTGACGG CCGGGCTCTC CTCCGTTTCG AACAGCGCCG TCGAGGCCGC CCGCGACGTC
GGCGCAAGGC CGCTTCGGGT CTTCATCTCG ATCATCCTGC CGCGCATGGG CAATTCGCTG
CTGGTGACGG CTTCGTTCGC CGTGCTCGGC ATCTTCTCCG CCTTCACCCT TCCCTATGTG
CTCGGCCCGG CATCGCCTGA AATGATGGGG CCGTTCATGC AGCGCACCTT CGCCGACATG
AACGACCCGC TGAATGCCAT GACCCAGGCC GTCATCACAT TCGGCTTCTG CCTGGTCTTC
GGCATCTTCT ACATCCGGTC GATCGCCCGC AACCGCGAGG CCCGGCCATG A
 
Protein sequence
MSAETALAAP RRHQSISRGS SIGLLLVALP VFLLAWLIVF PIFSAVFGTI FVRGPDGATA 
FSLASYRFFF TDGYSLGNLW LTLWTTAVCG VLLLAIGFPI ALYLRFSQGR LAAYVQGLAI
FPMFVPSIIL AYALIRTVGP NGTVDLLLNS VGLPKLRTPY LTPWGPVIGL VWDNLPLTVL
MLTAGLSSVS NSAVEAARDV GARPLRVFIS IILPRMGNSL LVTASFAVLG IFSAFTLPYV
LGPASPEMMG PFMQRTFADM NDPLNAMTQA VITFGFCLVF GIFYIRSIAR NREARP