| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6556 |
|---|
| Symbol | |
|---|
| ID | 6983626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011371 |
|---|
| Strand | - |
|---|
| Start bp | 230374 |
|---|
| End bp | 231168 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643399552 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002284308 |
|---|
| Protein GI | 209552393 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.240433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.446574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA TTTTCTGCAG CCTCCGGCAG CTTTCGGTCT CCTATCGGCG CGGCAGGAAC
AATGCTGCCG CGCTCGATCG TATCGATCTC GATATTGCCA CCGGCGAAAG GCTTGCGATC
ATCGGCGAAA GCGGCTCCGG CAAGAGCACG CTCGCCCGGG CGCTGGCTGG TCTGCTGCCT
AAAGGAACGA AGGTCGCAGG CGAGATGCTG TGGCCCGCCC TCGGCCACCC GCCCCGCCCG
GGCCGCGATT TCGGCTTCGT CTTCCAAGAT CCGGGCACAA GCCTCAATCC CGTCCTGACG
ATCGGTGAGC AGATCGCCGA AGGCGCCAGG CGCCATCTCG GGCTCAGCTG GAAACAGGCC
TCTCTCAGAG CCGAGGAACT GCTCGGGCGG GTAAGGATGC CTGAGCCCGA CAAGGCGATG
CGGGCCTTTC CGCACCAGCT TTCCGGCGGC CAGCGTCAGC GTGTGGCGAT CGCCGCGGCA
ATCGCTGCAA GGCCTGCGCT GTTGATCGCC GACGAGGCGA CGAGCGCGCT TGACGTCGTG
GTCCAGGCCG AGATCATCCG CCTGCTCGAC GGGCTGGTGC GCGAGGACGG CATGACGCTG
CTCTTCATCA CCCACGACAT CGCGCTCGCC TCCGGGTTCG TCGACCGGAT CGCCGTCTTT
CGCGATGCGC GCCTCGTCGA GGCGGGCCCG GTCCATTCGG TGCTTTCGGC GCCCGAAAGC
GGCTATACCG CGGCTCTCAT CGCCAGCCAT CGCGACCTCG CGACGCCGCC GCTGATCGCG
GAGCTGTCCT CATGA
|
|---|
| Protein sequence | MSGIFCSLRQ LSVSYRRGRN NAAALDRIDL DIATGERLAI IGESGSGKST LARALAGLLP
KGTKVAGEML WPALGHPPRP GRDFGFVFQD PGTSLNPVLT IGEQIAEGAR RHLGLSWKQA
SLRAEELLGR VRMPEPDKAM RAFPHQLSGG QRQRVAIAAA IAARPALLIA DEATSALDVV
VQAEIIRLLD GLVREDGMTL LFITHDIALA SGFVDRIAVF RDARLVEAGP VHSVLSAPES
GYTAALIASH RDLATPPLIA ELSS
|
|---|
| |