| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6355 |
|---|
| Symbol | |
|---|
| ID | 6983657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011371 |
|---|
| Strand | - |
|---|
| Start bp | 26 |
|---|
| End bp | 1315 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643399355 |
|---|
| Product | cytosine deaminase |
|---|
| Protein accession | YP_002284111 |
|---|
| Protein GI | 209552196 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.616526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.149808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATT TGATCGTCAG AAATGCAAAT CTCCCCGATG GCTCAGAGAG TATCGATATC
GGCATCCAGG GCGGCAAGAT CATCGCTCTT GAGCACAATC TCCAGGCGCA GGCGGGTGAA
GAGATCGACG CGACCGGTCG GCTGGTCAGC CCGCCCTTCG TCGATCCGCA TTTCCATATG
GATGCCACCC TGTCCCTCGG CTTGCCGCGC ATGAATGTAT CCGGCACGCT GCTTGAAGGA
ATCGCGCTCT GGGGCGAGCT TCGCCCGATC GTGACAAAAG AAGAATTGGT CGACCGTGCG
TTGCGCTATT GCGACCTGGC TGTCACCCAG GGGCTGCTCT TCATTCGCAG CCATGTCGAC
ACCAGCGATC CCAGGCTGGT GACCGTCGAG GCGATGATCG AGGTTCGCGA AAAGGTCGCC
CCCTATATCG ACCTGCAATT GGTCGCTTTT CCTCAGGATG GCTATTACCG CTCGCCCGGC
GCGATCGACA CCCTCAACCG CGCCCTCGAC ATGGGTGTCG ATATCGTTGG CGGCATTCCC
CACTTCGAAC GGACGATGGG CGAAGGCACG GCGTCGGTCG AGGCGCTCTG CCGCATCGCT
GCCGACCGCG GCCTGCCGGT CGACATGCAT TGCGACGAAA CCGATGATCC GCACTCGCGC
CATATCGAGA CGCTGGCTGC GGAGACCATC CGCTTCGGGC TCAAGGGGCG CGTTGCCGGC
TCGCATCTGA CCTCAATGCA TTCGATGGAT AATTATTATG TCTCCAAGCT CATTCCGCTG
ATGGCGGAGG CCGAGATCAA CGTCATCCCC AATCCGCTGA TCAACATCAT GCTGCAGGGC
CGGCACGACA CCTATCCGAA ACGCCGCGGC ATGACCCGCG TGCGCGAATT GATGGATGCC
GGGCTTAATG TTTCCTTCGG GCACGATTGC GTCATGGACC CCTGGTACTC GATGGGATCG
GGCGACATGC TGGAAGTCGG CCATATGGCG ATCCATGTCG CGCAGATGGC CGGCATCGAC
GACAAGAAGA GGATATTCGA GGCGCTGACC GTCAATTCGG CGAGGACGAT GGGGCTTGCA
GGCTATGGCC TGGAAAAGGG ATGCAACGCC GACCTCGTCA TCCTCCAGGC GAGCGACACG
CTGGAAGCGC TGCGGCTGAA GCCGAGCCGG CTGGCGGTGA TCCGGCGCGG TAAGGTCGTC
GCCCGCTCGG CGCCGCGCAT CGACGAGCTT TTCCTGGACG GGCGCCCTGC CCGGATCGAT
GGCGGCCTGG ACTATATCCC CCGCTATTGA
|
|---|
| Protein sequence | MFDLIVRNAN LPDGSESIDI GIQGGKIIAL EHNLQAQAGE EIDATGRLVS PPFVDPHFHM
DATLSLGLPR MNVSGTLLEG IALWGELRPI VTKEELVDRA LRYCDLAVTQ GLLFIRSHVD
TSDPRLVTVE AMIEVREKVA PYIDLQLVAF PQDGYYRSPG AIDTLNRALD MGVDIVGGIP
HFERTMGEGT ASVEALCRIA ADRGLPVDMH CDETDDPHSR HIETLAAETI RFGLKGRVAG
SHLTSMHSMD NYYVSKLIPL MAEAEINVIP NPLINIMLQG RHDTYPKRRG MTRVRELMDA
GLNVSFGHDC VMDPWYSMGS GDMLEVGHMA IHVAQMAGID DKKRIFEALT VNSARTMGLA
GYGLEKGCNA DLVILQASDT LEALRLKPSR LAVIRRGKVV ARSAPRIDEL FLDGRPARID
GGLDYIPRY
|
|---|
| |