Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6341 |
Symbol | |
ID | 6983414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | - |
Start bp | 292846 |
End bp | 293496 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643399343 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002284099 |
Protein GI | 209552183 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.21145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG TTCTTCTTTT TTTCGCCAAA GCCGTTCCCG GACTTCTCGT CAGCCTGCAG GTCACAATCG GAGTCGTCGC GATCGGCATT TCGCTTGGCC TCACTCTCGC TCTGGGTCTT GTCAACAATC ATGCGGGAAT CCGGACGTTT GCTCTCGTTG CCGTCGAAAT CTTCCGTGGT ATTCCAGCCC TCGTCATGCT GTACATCGTC TATTTCGGCC TGCCACAATT CGAGGTTGTC ATGGATGCGA TCCCGTCTGC TTCCGTGGCA CTCGGCATCA GCATGGGCGG CTTCCTCGCG GATGTGTTCA AGGCAGGAAT TCTGGCGATT CCACTTGGGC AGCGGGAAGC GGCGGCCGCC CTCGGCCTTA GCCGGTCGAC GGCGTTTACA CGGGTAATCC TTCCGCAAAC CATCCGGATC GTAACGCCGC CGGTACTCGG TTACGTCATC AGTTACTTTC AGGCGACCGC GCTTGCCTAC ACCATCGCGG TTCCCGAACT GATGAGCCGA TCCTACACCG TGGCCGCAGA CAACTTTCGA TTCCTCGAAG TGCTCACGAT GGCAGGCTTT CTTTACGCAG TTATCTGCAT TCCCTCAGCG CGCTGGGTCA ATCGGTTGAG CAACCGCGAT GAATTCGAAT CCAAGCATTA A
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Protein sequence | MELVLLFFAK AVPGLLVSLQ VTIGVVAIGI SLGLTLALGL VNNHAGIRTF ALVAVEIFRG IPALVMLYIV YFGLPQFEVV MDAIPSASVA LGISMGGFLA DVFKAGILAI PLGQREAAAA LGLSRSTAFT RVILPQTIRI VTPPVLGYVI SYFQATALAY TIAVPELMSR SYTVAADNFR FLEVLTMAGF LYAVICIPSA RWVNRLSNRD EFESKH
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