Gene Rleg2_6280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6280 
Symbol 
ID6983353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp230879 
End bp231667 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID643399288 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002284044 
Protein GI209552128 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.365337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAG TGGATACCGA AGGAAATCGG ATCTTGGAAG GGAAAGTCGC GGTTATCACC 
GGCGGCGGCC GCGGCATGGG AAAGGAGATT GCCATAACCT TCGCCAAAGC GGGCGCGATC
GTCGCGGTTT GCGATCTTGC CCTTGCGAAT CTGGCTGAAG TTGAAAACGA GATCAAAGCT
ATCGGGGGGG TGTGCCTAAG CTTAACAGCG GACATCAGCA GGAAGGCGGA TGTCGAGAAA
ATAATGGGCG AGATCCACAC CAAGTTCAAT AAGATCGACA TTTTAATCAA TAACGCCGGC
ATTTGCATTT CAAGCCCTTT GCTCGAGGTT TCTGTCGAGG AATGGGATGC CAATATGAAC
GTCAACCTCA AGGGCGCGTT CCTTTGCCTA CAAGGCGCGG CCAGGTACAT GGTCGAGCAA
AAGAGCGGCA AGATCGTCAA TATCTCCTCG ATCTGCGGCC GAGGAGCAGT AAGTGAAGGC
GTCGCCTACA GCGCATCCAA AGCGGGGGTC ATTCAAATGA CCTGCAATGC CGCGGCGGAG
CTTGGCGCTT ATAACATCAA CGTGAACAGC ATCGCGCCTG GGTTCGTCGC CACGCCACTG
GTGCGGGAGG GCAAGACCGA GGAGGAGTAC GCCGCGATGA TCGCCGAATT CTCCAAGCCG
ACGGTGCTAG GAAAGACCGG TCTGCCGAAA GACATCGCAA ACACTGCACT CTTCCTGGTT
TCCGAAGAGG CCGCCTACAT TAGCGGCCAG ACGATCCCGG TAGACGGCGG ACGAAAGAAC
CGCATGTAG
 
Protein sequence
MRAVDTEGNR ILEGKVAVIT GGGRGMGKEI AITFAKAGAI VAVCDLALAN LAEVENEIKA 
IGGVCLSLTA DISRKADVEK IMGEIHTKFN KIDILINNAG ICISSPLLEV SVEEWDANMN
VNLKGAFLCL QGAARYMVEQ KSGKIVNISS ICGRGAVSEG VAYSASKAGV IQMTCNAAAE
LGAYNINVNS IAPGFVATPL VREGKTEEEY AAMIAEFSKP TVLGKTGLPK DIANTALFLV
SEEAAYISGQ TIPVDGGRKN RM