| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5918 |
|---|
| Symbol | |
|---|
| ID | 6977305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | - |
|---|
| Start bp | 336125 |
|---|
| End bp | 337618 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643393371 |
|---|
| Product | phenylalanine/histidine ammonia-lyase |
|---|
| Protein accession | YP_002278189 |
|---|
| Protein GI | 209546299 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.18522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA ACATCGAGAC CGTGCTGACC TGGTGCGATG TCGCGCGCGT CGGGGCAGGG
GAGGCGCTGA CGCTGTCGCC GGCCGCCTGG GCGCGGGTCG AGCAGGCAAG CCGCATCGTC
GCCAGCATCG TCGAGACAGG CATGCGCGCC TATGGCGTCA ACACCGGCGT CGGGGCGCTC
GCCGATACCG TCGTCGATCG GGCCTCGCAG AGCCTGTTGT CGCGCAGCAT CGTGCTCAGC
CACGCCTGCG GCGTCGGGCC GTTGCTTGGG TCACATGAGG TGCGCGCCAT CATCGCCGCC
CAGATCGCCA ATTTTGCCCA TGGCCATTCC GGCGTGCGGC GCGAGATCGT CCAGCATCTC
ACGGCCATGT TGGAGCATGA CTGCATTCCC GACGTGCCGT CCAAGGGCTC GGCCGGTTAT
CTCACCCACA ATGCCCATAC CGCGCTGGTT CTGATCGGCG AAGGCAGCGC GACACTCGCC
GGCCGGCGCT TAAGCGGTCG CGAGGCGCTG GCCGCGATCG GCCTCGAACC GCTGGTGCTC
GGCGCCAAGG AGGGCTTGAG CCTCGTCAAC GGCACCGCCT GCGCCACCGG CCTGACCGCC
ACCGCGCTGT TGCGCGCCGA AAAACTGCTC GACTGGGCCG ATGCCATCGC GGCGCTGACG
CTGGAGGCGG CAGGCTGCCA GATCGCCGCC TTCGACGAGG CGGTGCTGGC GCTGCGCCCG
TCTGCCGGAA TCGAAAAAGT CGGAGCCACC TTGCGCGCTA GGCTTCGGGG CAGCGGCCTT
GTCGCCGTCG CCTCTGGCCG GCGCACCCAG GATGCGCTGA GCCTTCGCTC GGTACCGCAT
GCCCATGGCG CCGCCCGCGA TGTCTTCGAC AATTCCGCCC ATATCGCCGA TCAGGAACTT
GCCTCGGTCA CCGACAATCC TGCGGTGTCA GGCACGCCGG AACAGCCGAT CGTTTCCTCC
GAGGCCCATG CGGTGGCGCC GGCGCTCGGG CAGGCGGCTG ATAGCCTCGC TATTGCTCTG
GCGCAGATCG GCGCGATCAG CGAAAGGCGC ATGGACCGGC TGGTCAATCC GCTGGTGAGC
GGCCTGCCGT CCTTCCTGGC GAGTGACGCC GGCAGCCATT CCGGCTTCAT GATCGCCCAA
TATACCGCGG CAGCCCTCAG CAACGAAAAC CGCCGGCTCG CCGCGCCCGC GGCCATGGAT
GGCGGCCTGA CCTCCGGTCT GCAGGAGGAT TTCCTCGCAC ATCCGACCGC CGCCGCCGGC
AAGCTGCTCG CCGTCATCGA CAATGCCGAA TATATTCTGG CGATCGAGCT GATGGCGGGG
GCCCAGGCGC ATGATTTCCT GGCGGCGACC GCGCCGCGGG CGCCAGGCAC GGATCTCGTC
TATCAGGCGG TGCGGGAGCG TATCTCCCAT TATGGCGACG AGCGGCCGCT CAACGGCGAT
ATCGAGGCCG TGCGCAGCCT GATCCGCGAG ACGCTGCCGC CGGCAATCGT CTGA
|
|---|
| Protein sequence | MTINIETVLT WCDVARVGAG EALTLSPAAW ARVEQASRIV ASIVETGMRA YGVNTGVGAL
ADTVVDRASQ SLLSRSIVLS HACGVGPLLG SHEVRAIIAA QIANFAHGHS GVRREIVQHL
TAMLEHDCIP DVPSKGSAGY LTHNAHTALV LIGEGSATLA GRRLSGREAL AAIGLEPLVL
GAKEGLSLVN GTACATGLTA TALLRAEKLL DWADAIAALT LEAAGCQIAA FDEAVLALRP
SAGIEKVGAT LRARLRGSGL VAVASGRRTQ DALSLRSVPH AHGAARDVFD NSAHIADQEL
ASVTDNPAVS GTPEQPIVSS EAHAVAPALG QAADSLAIAL AQIGAISERR MDRLVNPLVS
GLPSFLASDA GSHSGFMIAQ YTAAALSNEN RRLAAPAAMD GGLTSGLQED FLAHPTAAAG
KLLAVIDNAE YILAIELMAG AQAHDFLAAT APRAPGTDLV YQAVRERISH YGDERPLNGD
IEAVRSLIRE TLPPAIV
|
|---|
| |