| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5759 |
|---|
| Symbol | |
|---|
| ID | 6977149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | - |
|---|
| Start bp | 164162 |
|---|
| End bp | 165358 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643393215 |
|---|
| Product | pyridoxal phosphate-dependent enzyme |
|---|
| Protein accession | YP_002278033 |
|---|
| Protein GI | 209546143 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR01437] uncharacterized pyridoxal phosphate-dependent enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.646746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATG ACATCAGACC TTCGCTCGGC CTTCGCCCCG TCATCAACGT ATCCGGCACG
ATGACCAGCC TCGGCGCTTC GATCGTCGTG CCGGAGGCGA TCGAGGCGAT GGCGTCGATC
CTGCCGCATT TCGTCGAGAT CAACGACCTG CAGCGCAAGG CAAGCGCCGT CATCGCCCGG
CTGACCGGCG GCGAGGCCGG CTTCGTCACC GCTTCCTGCT CGGCCGGCAT TTCGCTGGCC
GTCGCCGGCG CCATCACCGG CGACAATCTG CTGGCGATCG AGAAGCTGCC GGATGCCGTG
TCCGAGAAGA ACGAAGTGCT GGTGCAGATG GGCCATGTGG TGAGCTATGG CGCCCCCGTC
GACCAGGCGA TCCGGCTTGC CGGCGGCAAG GTCGTGCTTG TGGGACAGGC GACCTCGACG
CATCGCTTTC ACATGGAAAA GGCGATCACC GACAAGACCG CCGCGGCCGT CTTTGTCGTC
TCCCACCATG TCGTCGATTA CGGCCTGCTG AACCTCAAGG AATTCGTCGA GATCGCCCAT
GCCAGGGGTG TGCCCGTCAT CGTCGATGCG GCATCGGAAT ACGACCTCAG GATTTTCCTG
GAGCAGGGGG CCGATATCGC CCTTTACTCC GGCCACAAGT TCCTCGGCGG CCCGACCTCG
GGCATCGTTG CCGGCCGGAA GGAGCTGGTG CGTCATGCCT TCCTGCAGAA CATGGGCATC
GGCCGCGGCA TGAAGGTCGG CAAGGAGAGC ATCTTCGGCG TCATGGCCGC ACTCGAAGCC
TGGGAAAAGC GCGATCACGC CGGCATCCGC GAGCGCGAGA CCAGCTCTCT CAATCTGTGG
AAGCGCACAC TCGACGGCCG TCCCGGCGTT AGCGCGCTGA TCGAGCCCGA TCCGACCAAC
AATCCGCTCG ACCGGCTGCG TCTCATCGTC GATCCCGAGC AGGCGCATAT CACCGCCTGG
GATCTGGCTG ATGCGCTGGC GAGGGGCGAC CCGCCGATCA TCGTGCGCGA TCACGAGGTG
GAGCACCGCT ATTTCTATCT CGACCCGTGC AACCTGCATC CGGGCCAGGA TGTCATCGTT
GCAAACCGCC TGGCCGAGGA ACTCGACAAG GCGCGCGCCT CCAACGAGAT CATCGCAACC
CCGATCGAAA ATCGCAGCCG GCACCGCTTC GACGGTGTGC TGCGCTGGCC GGATTGA
|
|---|
| Protein sequence | MPNDIRPSLG LRPVINVSGT MTSLGASIVV PEAIEAMASI LPHFVEINDL QRKASAVIAR
LTGGEAGFVT ASCSAGISLA VAGAITGDNL LAIEKLPDAV SEKNEVLVQM GHVVSYGAPV
DQAIRLAGGK VVLVGQATST HRFHMEKAIT DKTAAAVFVV SHHVVDYGLL NLKEFVEIAH
ARGVPVIVDA ASEYDLRIFL EQGADIALYS GHKFLGGPTS GIVAGRKELV RHAFLQNMGI
GRGMKVGKES IFGVMAALEA WEKRDHAGIR ERETSSLNLW KRTLDGRPGV SALIEPDPTN
NPLDRLRLIV DPEQAHITAW DLADALARGD PPIIVRDHEV EHRYFYLDPC NLHPGQDVIV
ANRLAEELDK ARASNEIIAT PIENRSRHRF DGVLRWPD
|
|---|
| |