Gene Rleg2_5674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5674 
Symbol 
ID6977065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp67731 
End bp68399 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID643393131 
Producthaloacid dehalogenase, type II 
Protein accessionYP_002277949 
Protein GI209546059 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.799696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTT TCCGCCCGAA ATACATCACC TTCGACTGCC ACGGCACGCT GATCAATTTT 
CAGATGGCGG AAGCCGCACG CGACCTTTAT GGCGACCGTA TGAACGAGCA GAAGATGCTC
GAGTTCATCA AGGACTTCTC CGCATACCGT CTGGATGAAG TCATCGGGGA TTGGAAGCCC
TATGCCGACG TGGTCCATAA CGCGCTCTCA AGAACCTGCA AACGCAACGG CATCGACTTC
AGGGACGAAG ACGCAAGGCT CGTATACGAA CGCGTACCGA CCTGGGGACC GCATGCGGAC
GTTCCCGCTG GTCTTGCCAA AGTCGCCAAG GAAATTCCAC TCGTCATCCT TTCGAACGCC
ATGAACGCGC AGATCATGTC GAATGTCGGA AAGCTCGGCG CCCCCTTCCA CGCAGTTTAT
ACGGCCGAAG AGGCTGGTGC CTACAAGCCG CATTTCCGCG CCTTCGAATA TATGCTGGAC
ATGCTCGGCT GCGGCCCGGA AGACATACTC CATTGCTCCT CCTCGTTCCG CTACGATCTG
ATGAGCGCCC ATGACCTCGG GATCAAGAAC AAGGTCTGGG TCAATCGCGG TCATGAGCCG
GCCAATCCCT ATTACGGTTA TACCGAGATC GCCGATATCT CGGAATTGCC AGGTGTCGTC
GGGCTCTAA
 
Protein sequence
MAIFRPKYIT FDCHGTLINF QMAEAARDLY GDRMNEQKML EFIKDFSAYR LDEVIGDWKP 
YADVVHNALS RTCKRNGIDF RDEDARLVYE RVPTWGPHAD VPAGLAKVAK EIPLVILSNA
MNAQIMSNVG KLGAPFHAVY TAEEAGAYKP HFRAFEYMLD MLGCGPEDIL HCSSSFRYDL
MSAHDLGIKN KVWVNRGHEP ANPYYGYTEI ADISELPGVV GL