Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5514 |
Symbol | |
ID | 6978608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1163761 |
End bp | 1164546 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394613 |
Product | ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
Protein accession | YP_002279431 |
Protein GI | 209547513 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | [TIGR03005] ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.595344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000996868 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCAGC CCATCATCCG CATCGACAAC ATCGTCAAGA GATACGGCCC GCTGACCGTG CTCGACGGCC TTTCGATGAA TGTCATGCCG GGGGAGAAGC TGGCGCTGAT CGGGCCGTCA GGCTCCGGCA AGACGACGAT CCTGCGCATT CTGATGACGC TGGAGACGAT CAGCGGCGGC CATATCGAGG TCGACGGCGA ACAGCTCTAC CATATGGCTG GCAGCAGCGG GCTGGTGCCG GCCGATGAAC GGCATCTGCA TCGCATGCGC GAAAAGATCG GCATGGTCTT CCAGCACTTC AATCTGTTTC CCCACAAATG CGTGCTCGAC AATGTGACGT TGGCGCCGAT GCTGACCAAG GGCATCAAGC GGCCGCAGGC CGAAAAGCGG GCGATGGAGC TTCTCGATAT GGTCGGCCTG GCCGACAAGG CGAAAAGCGT CCCGGCGCAG CTTTCCGGCG GACAGAAGCA GCGCGTCGCC ATTGCCCGGG CGCTGGCGCT GTCGCCGAAA ATCATGCTGT TCGACGAAGT CACCTCGGCG CTCGACCCGG AACTGGTCGA AGAGGTGCTG AACGTCATGC GCCGGCTGGC TTCCGAGACC GATATGACCA TGCTTCTCGT CACCCATGAG ATGGGTTTCG CCCACGATTT TGCCGACCGC GTCTTGTTCT TCGATCGCGG CAAGATCGTC GAGGAAGGCA AGCCGGGCGA TATCTTCCGA AATCCGACGC AGGAGCGGAC GCAGACCTTC CTGCGCAAGA TCATTGCGGC TGGGCACCGC GTCTGA
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Protein sequence | MPQPIIRIDN IVKRYGPLTV LDGLSMNVMP GEKLALIGPS GSGKTTILRI LMTLETISGG HIEVDGEQLY HMAGSSGLVP ADERHLHRMR EKIGMVFQHF NLFPHKCVLD NVTLAPMLTK GIKRPQAEKR AMELLDMVGL ADKAKSVPAQ LSGGQKQRVA IARALALSPK IMLFDEVTSA LDPELVEEVL NVMRRLASET DMTMLLVTHE MGFAHDFADR VLFFDRGKIV EEGKPGDIFR NPTQERTQTF LRKIIAAGHR V
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